Literature DB >> 33514839

Multimodal in vivo recording using transparent graphene microelectrodes illuminates spatiotemporal seizure dynamics at the microscale.

Nicolette Driscoll1,2,3, Richard E Rosch1,4,5, Brendan B Murphy1,2,3, Arian Ashourvan1,2, Ramya Vishnubhotla6, Olivia O Dickens7, A T Charlie Johnson6, Kathryn A Davis2,8, Brian Litt1,2,8, Danielle S Bassett1,6,8,9,10,11, Hajime Takano12,13, Flavia Vitale14,15,16,17.   

Abstract

Neurological disorders such as epilepsy arise from disrupted brain networks. Our capacity to treat these disorders is limited by our inability to map these networks at sufficient temporal and spatial scales to target interventions. Current best techniques either sample broad areas at low temporal resolution (e.g. calcium imaging) or record from discrete regions at high temporal resolution (e.g. electrophysiology). This limitation hampers our ability to understand and intervene in aberrations of network dynamics. Here we present a technique to map the onset and spatiotemporal spread of acute epileptic seizures in vivo by simultaneously recording high bandwidth microelectrocorticography and calcium fluorescence using transparent graphene microelectrode arrays. We integrate dynamic data features from both modalities using non-negative matrix factorization to identify sequential spatiotemporal patterns of seizure onset and evolution, revealing how the temporal progression of ictal electrophysiology is linked to the spatial evolution of the recruited seizure core. This integrated analysis of multimodal data reveals otherwise hidden state transitions in the spatial and temporal progression of acute seizures. The techniques demonstrated here may enable future targeted therapeutic interventions and novel spatially embedded models of local circuit dynamics during seizure onset and evolution.

Entities:  

Year:  2021        PMID: 33514839      PMCID: PMC7846732          DOI: 10.1038/s42003-021-01670-9

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  59 in total

1.  Reconstruction of firing rate changes across neuronal populations by temporally deconvolved Ca2+ imaging.

Authors:  Emre Yaksi; Rainer W Friedrich
Journal:  Nat Methods       Date:  2006-05       Impact factor: 28.547

2.  Sparse non-negative matrix factorizations via alternating non-negativity-constrained least squares for microarray data analysis.

Authors:  Hyunsoo Kim; Haesun Park
Journal:  Bioinformatics       Date:  2007-05-05       Impact factor: 6.937

3.  Optogenetics in neural systems.

Authors:  Ofer Yizhar; Lief E Fenno; Thomas J Davidson; Murtaza Mogri; Karl Deisseroth
Journal:  Neuron       Date:  2011-07-14       Impact factor: 17.173

4.  Self-organised transients in a neural mass model of epileptogenic tissue dynamics.

Authors:  Marc Goodfellow; Kaspar Schindler; Gerold Baier
Journal:  Neuroimage       Date:  2011-09-05       Impact factor: 6.556

5.  Transparent and flexible low noise graphene electrodes for simultaneous electrophysiology and neuroimaging.

Authors:  Duygu Kuzum; Hajime Takano; Euijae Shim; Jason C Reed; Halvor Juul; Andrew G Richardson; Julius de Vries; Hank Bink; Marc A Dichter; Timothy H Lucas; Douglas A Coulter; Ertugrul Cubukcu; Brian Litt
Journal:  Nat Commun       Date:  2014-10-20       Impact factor: 14.919

6.  Microphysiology of epileptiform activity in human neocortex.

Authors:  Catherine A Schevon; Sau K Ng; Joshua Cappell; Robert R Goodman; Guy McKhann; Allen Waziri; Almut Branner; Alexandre Sosunov; Charles E Schroeder; Ronald G Emerson
Journal:  J Clin Neurophysiol       Date:  2008-12       Impact factor: 2.177

7.  Seizure localization using ictal phase-locked high gamma: A retrospective surgical outcome study.

Authors:  Shennan A Weiss; Athena Lemesiou; Robert Connors; Garrett P Banks; Guy M McKhann; Robert R Goodman; Binsheng Zhao; Christopher G Filippi; Mark Nowell; Roman Rodionov; Beate Diehl; Andrew W McEvoy; Matthew C Walker; Andrew J Trevelyan; Lisa M Bateman; Ronald G Emerson; Catherine A Schevon
Journal:  Neurology       Date:  2015-05-13       Impact factor: 9.910

8.  Optogenetic and potassium channel gene therapy in a rodent model of focal neocortical epilepsy.

Authors:  Robert C Wykes; Joost H Heeroma; Laura Mantoan; Kaiyu Zheng; Douglas C MacDonald; Karl Deisseroth; Kevan S Hashemi; Matthew C Walker; Stephanie Schorge; Dimitri M Kullmann
Journal:  Sci Transl Med       Date:  2012-11-12       Impact factor: 17.956

9.  Transparent arrays of bilayer-nanomesh microelectrodes for simultaneous electrophysiology and two-photon imaging in the brain.

Authors:  Yi Qiang; Pietro Artoni; Kyung Jin Seo; Stanislav Culaclii; Victoria Hogan; Xuanyi Zhao; Yiding Zhong; Xun Han; Po-Min Wang; Yi-Kai Lo; Yueming Li; Henil A Patel; Yifu Huang; Abhijeet Sambangi; Jung Soo V Chu; Wentai Liu; Michela Fagiolini; Hui Fang
Journal:  Sci Adv       Date:  2018-09-05       Impact factor: 14.136

10.  High-speed, miniaturized fluorescence microscopy in freely moving mice.

Authors:  Benjamin A Flusberg; Axel Nimmerjahn; Eric D Cocker; Eran A Mukamel; Robert P J Barretto; Tony H Ko; Laurie D Burns; Juergen C Jung; Mark J Schnitzer
Journal:  Nat Methods       Date:  2008-10-05       Impact factor: 28.547

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  7 in total

Review 1.  Emerging approaches for sensing and modulating neural activity enabled by nanocarbons and carbides.

Authors:  Nicolette Driscoll; Royce Dong; Flavia Vitale
Journal:  Curr Opin Biotechnol       Date:  2021-10-29       Impact factor: 9.740

2.  Neurophotonic tools for microscopic measurements and manipulation: status report.

Authors:  Ahmed S Abdelfattah; Sapna Ahuja; Taner Akkin; Srinivasa Rao Allu; Joshua Brake; David A Boas; Erin M Buckley; Robert E Campbell; Anderson I Chen; Xiaojun Cheng; Tomáš Čižmár; Irene Costantini; Massimo De Vittorio; Anna Devor; Patrick R Doran; Mirna El Khatib; Valentina Emiliani; Natalie Fomin-Thunemann; Yeshaiahu Fainman; Tomas Fernandez-Alfonso; Christopher G L Ferri; Ariel Gilad; Xue Han; Andrew Harris; Elizabeth M C Hillman; Ute Hochgeschwender; Matthew G Holt; Na Ji; Kıvılcım Kılıç; Evelyn M R Lake; Lei Li; Tianqi Li; Philipp Mächler; Evan W Miller; Rickson C Mesquita; K M Naga Srinivas Nadella; U Valentin Nägerl; Yusuke Nasu; Axel Nimmerjahn; Petra Ondráčková; Francesco S Pavone; Citlali Perez Campos; Darcy S Peterka; Filippo Pisano; Ferruccio Pisanello; Francesca Puppo; Bernardo L Sabatini; Sanaz Sadegh; Sava Sakadzic; Shy Shoham; Sanaya N Shroff; R Angus Silver; Ruth R Sims; Spencer L Smith; Vivek J Srinivasan; Martin Thunemann; Lei Tian; Lin Tian; Thomas Troxler; Antoine Valera; Alipasha Vaziri; Sergei A Vinogradov; Flavia Vitale; Lihong V Wang; Hana Uhlířová; Chris Xu; Changhuei Yang; Mu-Han Yang; Gary Yellen; Ofer Yizhar; Yongxin Zhao
Journal:  Neurophotonics       Date:  2022-04-27       Impact factor: 4.212

3.  Illuminating Seizures: Combined Optical and Electrophysiological Recording Techniques Provide Novel Insights Into Seizure Dynamics.

Authors:  Thomas J Foutz; Michael Wong
Journal:  Epilepsy Curr       Date:  2021-10-20       Impact factor: 7.500

4.  Multimodal, Multiscale Insights into Hippocampal Seizures Enabled by Transparent, Graphene-Based Microelectrode Arrays.

Authors:  Patrick J Mulcahey; Yuzhang Chen; Nicolette Driscoll; Brendan B Murphy; Olivia O Dickens; A T Charlie Johnson; Flavia Vitale; Hajime Takano
Journal:  eNeuro       Date:  2022-05-09

5.  Combining Cortical Voltage Imaging and Hippocampal Electrophysiology for Investigating Global, Multi-Timescale Activity Interactions in the Brain.

Authors:  Rafael Pedrosa; Chenchen Song; Thomas Knöpfel; Francesco Battaglia
Journal:  Int J Mol Sci       Date:  2022-06-19       Impact factor: 6.208

6.  Multilayer CVD graphene electrodes using a transfer-free process for the next generation of optically transparent and MRI-compatible neural interfaces.

Authors:  Nasim Bakhshaee Babaroud; Merlin Palmar; Andrada Iulia Velea; Chiara Coletti; Sebastian Weingärtner; Frans Vos; Wouter A Serdijn; Sten Vollebregt; Vasiliki Giagka
Journal:  Microsyst Nanoeng       Date:  2022-09-26       Impact factor: 8.006

7.  Improving equity in human genomics research.

Authors: 
Journal:  Commun Biol       Date:  2022-03-24
  7 in total

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