Literature DB >> 33504663

New Insights and Enhanced Human Norovirus Cultivation in Human Intestinal Enteroids.

Khalil Ettayebi1, Victoria R Tenge1, Nicolas W Cortes-Penfield2, Sue E Crawford1, Frederick H Neill1, Xi-Lei Zeng1, Xiaomin Yu1, B Vijayalakshmi Ayyar1, Douglas Burrin3, Sasirekha Ramani1, Robert L Atmar1,2, Mary K Estes4,2.   

Abstract

Human noroviruses (HuNoVs) are the leading cause of epidemic and sporadic acute gastroenteritis worldwide. We previously demonstrated human intestinal stem cell-derived enteroids (HIEs) support cultivation of several HuNoV strains. However, HIEs did not support virus replication from every HuNoV-positive stool sample, which led us to test and optimize new medium conditions, identify characteristics of stool samples that allow replication, and evaluate consistency of replication over time. Optimization of our HIE-HuNoV culture system has shown the following: (i) a new HIE culture medium made with conditioned medium from a single cell line and commercial media promotes robust replication of HuNoV strains that replicated poorly in HIEs grown in our original culture medium made with conditioned media from 3 separate cell lines; (ii) GI.1, 11 GII genotypes (GII.1, GII.2, GII.3, GII.4, GII.6, GII.7, GII.8, GII.12, GII.13, GII.14, and GII.17), and six GII.4 variants can be cultivated in HIEs; (iii) successful replication is more likely with virus in stools with higher virus titers; (iv) GII.4_Sydney_2012 virus replication was reproducible over 3 years; and (v) HuNoV infection is restricted to the small intestine, based on replication of two viral strains in duodenal and ileal HIEs, but not colonoids, from two susceptible donors. These results improve the HIE culture system for HuNoV replication. Use of HIEs by several laboratories worldwide to study the molecular mechanisms that regulate HuNoV replication confirms the usefulness of this culture system, and our optimized methods for virus replication will advance the development of effective therapies and methods for virus control.IMPORTANCE Human noroviruses (HuNoVs) are highly contagious and cause acute and sporadic diarrheal illness in all age groups. In addition, chronic infections occur in immunocompromised cancer and transplant patients. These viruses are antigenically and genetically diverse, and there are strain-specific differences in binding to cellular attachment factors. In addition, new discoveries are being made on strain-specific differences in virus entry and replication and the epithelial cell response to infection in human intestinal enteroids. Human intestinal enteroids are a biologically relevant model to study HuNoVs; however, not all strains can be cultivated at this time. A complete understanding of HuNoV biology thus requires cultivation conditions that will allow the replication of multiple strains. We report optimization of HuNoV cultivation in human intestinal enteroid cultures to increase the numbers of cultivatable strains and the magnitude of replication, which is critical for testing antivirals, neutralizing antibodies, and methods of virus inactivation.
Copyright © 2021 Ettayebi et al.

Entities:  

Keywords:  human intestinal enteroids; human norovirus; virus replication

Mesh:

Substances:

Year:  2021        PMID: 33504663      PMCID: PMC7885322          DOI: 10.1128/mSphere.01136-20

Source DB:  PubMed          Journal:  mSphere        ISSN: 2379-5042            Impact factor:   4.389


  40 in total

1.  Parenteral lipids shape gut bile acid pools and microbiota profiles in the prevention of cholestasis in preterm pigs.

Authors:  Lee Call; Tiffany Molina; Barbara Stoll; Greg Guthrie; Shaji Chacko; Jogchum Plat; Jason Robinson; Sen Lin; Caitlin Vonderohe; Mahmoud Mohammad; Dennis Kunichoff; Stephanie Cruz; Patricio Lau; Muralidhar Premkumar; Jon Nielsen; Zhengfeng Fang; Oluyinka Olutoye; Thomas Thymann; Robert Britton; Per Sangild; Douglas Burrin
Journal:  J Lipid Res       Date:  2020-04-29       Impact factor: 5.922

2.  Aichi virus, norovirus, astrovirus, enterovirus, and rotavirus involved in clinical cases from a French oyster-related gastroenteritis outbreak.

Authors:  Françoise S Le Guyader; Jean-Claude Le Saux; Katia Ambert-Balay; Joanna Krol; Ophelie Serais; Sylvain Parnaudeau; Hélène Giraudon; Gilles Delmas; Monique Pommepuy; Pierre Pothier; Robert L Atmar
Journal:  J Clin Microbiol       Date:  2008-10-08       Impact factor: 5.948

Review 3.  Healthcare epidemiology: gastrointestinal flu: norovirus in health care and long-term care facilities.

Authors:  Maria A Said; Trish M Perl; Cynthia L Sears
Journal:  Clin Infect Dis       Date:  2008-11-01       Impact factor: 9.079

4.  Updated classification of norovirus genogroups and genotypes.

Authors:  Preeti Chhabra; Miranda de Graaf; Gabriel I Parra; Martin Chi-Wai Chan; Kim Green; Vito Martella; Qiuhong Wang; Peter A White; Kazuhiko Katayama; Harry Vennema; Marion P G Koopmans; Jan Vinjé
Journal:  J Gen Virol       Date:  2019-10       Impact factor: 3.891

5.  Human Intestinal Enteroids: a New Model To Study Human Rotavirus Infection, Host Restriction, and Pathophysiology.

Authors:  Kapil Saxena; Sarah E Blutt; Khalil Ettayebi; Xi-Lei Zeng; James R Broughman; Sue E Crawford; Umesh C Karandikar; Narayan P Sastri; Margaret E Conner; Antone R Opekun; David Y Graham; Waqar Qureshi; Vadim Sherman; Jennifer Foulke-Abel; Julie In; Olga Kovbasnjuk; Nicholas C Zachos; Mark Donowitz; Mary K Estes
Journal:  J Virol       Date:  2015-10-07       Impact factor: 5.103

6.  Norovirus and medically attended gastroenteritis in U.S. children.

Authors:  Daniel C Payne; Jan Vinjé; Peter G Szilagyi; Kathryn M Edwards; Mary Allen Staat; Geoffrey A Weinberg; Caroline B Hall; James Chappell; David I Bernstein; Aaron T Curns; Mary Wikswo; S Hannah Shirley; Aron J Hall; Benjamin Lopman; Umesh D Parashar
Journal:  N Engl J Med       Date:  2013-03-21       Impact factor: 91.245

7.  Development of a primary human Small Intestine-on-a-Chip using biopsy-derived organoids.

Authors:  Magdalena Kasendra; Alessio Tovaglieri; Alexandra Sontheimer-Phelps; Sasan Jalili-Firoozinezhad; Amir Bein; Angeliki Chalkiadaki; William Scholl; Cheng Zhang; Hannah Rickner; Camilla A Richmond; Hu Li; David T Breault; Donald E Ingber
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

Review 8.  Human Norovirus Cultivation in Nontransformed Stem Cell-Derived Human Intestinal Enteroid Cultures: Success and Challenges.

Authors:  Mary K Estes; Khalil Ettayebi; Victoria R Tenge; Kosuke Murakami; Umesh Karandikar; Shih-Ching Lin; B Vijayalakshmi Ayyar; Nicolas W Cortes-Penfield; Kei Haga; Frederick H Neill; Antone R Opekun; James R Broughman; Xi-Lei Zeng; Sarah E Blutt; Sue E Crawford; Sasirekha Ramani; David Y Graham; Robert L Atmar
Journal:  Viruses       Date:  2019-07-11       Impact factor: 5.048

9.  Global Economic Burden of Norovirus Gastroenteritis.

Authors:  Sarah M Bartsch; Benjamin A Lopman; Sachiko Ozawa; Aron J Hall; Bruce Y Lee
Journal:  PLoS One       Date:  2016-04-26       Impact factor: 3.240

10.  Genetic Manipulation of Human Intestinal Enteroids Demonstrates the Necessity of a Functional Fucosyltransferase 2 Gene for Secretor-Dependent Human Norovirus Infection.

Authors:  Kei Haga; Khalil Ettayebi; Victoria R Tenge; Umesh C Karandikar; Miranda A Lewis; Shih-Ching Lin; Frederick H Neill; B Vijayalakshmi Ayyar; Xi-Lei Zeng; Göran Larson; Sasirekha Ramani; Robert L Atmar; Mary K Estes
Journal:  mBio       Date:  2020-03-17       Impact factor: 7.867

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  18 in total

Review 1.  Advances in understanding of the innate immune response to human norovirus infection using organoid models.

Authors:  Wadzanai P Mboko; Preeti Chhabra; Marta Diez Valcarce; Veronica Costantini; Jan Vinjé
Journal:  J Gen Virol       Date:  2022-01       Impact factor: 3.891

2.  Drivers of transcriptional variance in human intestinal epithelial organoids.

Authors:  Zachary K Criss; Nobel Bhasin; Sara C Di Rienzi; Anubama Rajan; Kali Deans-Fielder; Ganesh Swaminathan; Nabiollah Kamyabi; Xi-Lei Zeng; Harsha Doddapaneni; Vipin K Menon; Deepavali Chakravarti; Clarissa Estrella; Xiaomin Yu; Ketki Patil; Joseph F Petrosino; James C Fleet; Michael P Verzi; Sylvia Christakos; Michael A Helmrath; Sumimasa Arimura; Ronald A DePinho; Robert A Britton; Anthony W Maresso; K Jane Grande-Allen; Sarah E Blutt; Sue E Crawford; Mary K Estes; Sasirekha Ramani; Noah F Shroyer
Journal:  Physiol Genomics       Date:  2021-10-06       Impact factor: 3.107

3.  Intestinal Norovirus Binding Patterns in Nonsecretor Individuals.

Authors:  Georges Tarris; Marie Estienney; Philippe Daval-Frérot; Anne-Cécile Lariotte; Damien Aubignat; Karine Sé; Christophe Michiels; Laurent Martin; Alexis de Rougemont; Gaël Belliot
Journal:  J Virol       Date:  2022-09-19       Impact factor: 6.549

Review 4.  CRISPR-Cas9-Based Technology for Studying Enteric Virus Infection.

Authors:  Junki Hirano; Kosuke Murakami; Tsuyoshi Hayashi
Journal:  Front Genome Ed       Date:  2022-06-08

Review 5.  Generation of CRISPR-Cas9-mediated genetic knockout human intestinal tissue-derived enteroid lines by lentivirus transduction and single-cell cloning.

Authors:  Shih-Ching Lin; Kei Haga; Xi-Lei Zeng; Mary K Estes
Journal:  Nat Protoc       Date:  2022-02-23       Impact factor: 17.021

6.  Optimizing Human Intestinal Enteroids for Environmental Monitoring of Human Norovirus.

Authors:  Katie N Overbey; Nicholas C Zachos; Caroline Coulter; Kellogg J Schwab
Journal:  Food Environ Virol       Date:  2021-06-30       Impact factor: 2.778

Review 7.  Bile Goes Viral.

Authors:  Victoria R Tenge; Kosuke Murakami; Wilhelm Salmen; Shih-Ching Lin; Sue E Crawford; Frederick H Neill; B V Venkataram Prasad; Robert L Atmar; Mary K Estes
Journal:  Viruses       Date:  2021-05-27       Impact factor: 5.048

8.  Experimental Methods to Study the Pathogenesis of Human Enteric RNA Viruses.

Authors:  Somya Aggarwal; Ebrahim Hassan; Megan T Baldridge
Journal:  Viruses       Date:  2021-05-25       Impact factor: 5.048

Review 9.  Organoids to Dissect Gastrointestinal Virus-Host Interactions: What Have We Learned?

Authors:  Sue E Crawford; Sasirekha Ramani; Sarah E Blutt; Mary K Estes
Journal:  Viruses       Date:  2021-05-27       Impact factor: 5.048

Review 10.  Norovirus in Cancer Patients: A Review.

Authors:  Divya Samantha Kondapi; Sasirekha Ramani; Mary K Estes; Robert L Atmar; Pablo C Okhuysen
Journal:  Open Forum Infect Dis       Date:  2021-03-14       Impact factor: 3.835

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