Literature DB >> 33500873

Development of a loop-mediated isothermal amplification (LAMP) assay for the identification of the invasive wood borer Aromia bungii (Coleoptera: Cerambycidae) from frass.

Domenico Rizzo1, Nicola Luchi2, Daniele Da Lio3, Linda Bartolini1, Francesco Nugnes4, Giovanni Cappellini1, Tommaso Bruscoli1, Chiara Salemi3, Raffaele V Griffo5, Antonio P Garonna6, Elisabetta Rossi3.   

Abstract

The red-necked longhorn beetle Aromia bungii (Faldermann, 1835) (Coleoptera: Cerambycidae) is native to east Asia, where it is a major pest of cultivated and ornamental species of the genus Prunus. Morphological or molecular discrimination of adults or larval specimens is required to identify this invasive wood borer. However, recovering larval stages of the pest from trunks and branches causes extensive damage to plants and is timewasting. An alternative approach consists in applying non-invasive molecular diagnostic tools to biological traces (i.e., fecal pellets, frass). In this way, infestations in host plants can be detected without destructive methods. This paper presents a protocol based on both real-time and visual loop-mediated isothermal amplification (LAMP), using DNA of A. bungii extracted from fecal particles in larval frass. Laboratory validations demonstrated the robustness of the protocols adopted and their reliability was confirmed performing an inter-lab blind panel. The LAMP assay and the qPCR SYBR Green method using the F3/B3 LAMP external primers were equally sensitive, and both were more sensitive than the conventional PCR (sensitivity > 103 to the same starting matrix). The visual LAMP protocol, due to the relatively easy performance of the method, could be a useful tool to apply in rapid monitoring of A. bungii and in the management of its outbreaks.
© The Author(s) 2021.

Entities:  

Keywords:  Invasive pest; Phytosanitary survey; Rapid diagnostic tool; Red-necked longhorn beetle

Year:  2021        PMID: 33500873      PMCID: PMC7815857          DOI: 10.1007/s13205-020-02602-w

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  35 in total

Review 1.  Loop-mediated isothermal amplification (LAMP): principle, features, and future prospects.

Authors:  Tsugunori Notomi; Yasuyoshi Mori; Norihiro Tomita; Hidetoshi Kanda
Journal:  J Microbiol       Date:  2015-01-04       Impact factor: 3.422

2.  Molecular Identification of the Western Drywood Termite (Isoptera: Kalotermitidae) by Loop-Mediated Isothermal Amplification of DNA from Fecal Pellets.

Authors:  Tatsuya Ide; Natsumi Kanzaki; Wakako Ohmura; Kimiko Okabe
Journal:  J Econ Entomol       Date:  2016-07-29       Impact factor: 2.381

3.  A novel and rapid loop-mediated isothermal amplification assay for the specific detection of Verticillium dahliae.

Authors:  A Moradi; M A Almasi; H Jafary; J Mercado-Blanco
Journal:  J Appl Microbiol       Date:  2013-12-13       Impact factor: 3.772

4.  Insect frass as a pathway for transmission of bacterial wilt of cucurbits.

Authors:  Robert F Mitchell; Lawrence M Hanks
Journal:  Environ Entomol       Date:  2009-04       Impact factor: 2.377

5.  Detection of the quarantine species Thrips palmi by loop-mediated isothermal amplification.

Authors:  Arnika Przybylska; Żaneta Fiedler; Halina Kucharczyk; Aleksandra Obrępalska-Stęplowska
Journal:  PLoS One       Date:  2015-03-20       Impact factor: 3.240

6.  LAMP assay and rapid sample preparation method for on-site detection of flavescence dorée phytoplasma in grapevine.

Authors:  P Kogovšek; J Hodgetts; J Hall; N Prezelj; P Nikolić; N Mehle; R Lenarčič; A Rotter; M Dickinson; N Boonham; M Dermastia; M Ravnikar
Journal:  Plant Pathol       Date:  2014-07-23       Impact factor: 2.590

7.  From laboratory to point of entry: development and implementation of a loop-mediated isothermal amplification (LAMP)-based genetic identification system to prevent introduction of quarantine insect species.

Authors:  Simon Blaser; Hanspeter Diem; Andreas von Felten; Morgan Gueuning; Michael Andreou; Neil Boonham; Jennifer Tomlinson; Pie Müller; Jürg Utzinger; Jürg E Frey; Andreas Bühlmann
Journal:  Pest Manag Sci       Date:  2018-03-12       Impact factor: 4.845

8.  Real-time loop-mediated isothermal amplification: an early-warning tool for quarantine plant pathogen detection.

Authors:  Chiara Aglietti; Nicola Luchi; Alessia Lucia Pepori; Paola Bartolini; Francesco Pecori; Aida Raio; Paolo Capretti; Alberto Santini
Journal:  AMB Express       Date:  2019-04-24       Impact factor: 3.298

9.  Application of the LAMP Assay as a Diagnostic Technique for Rapid Identification of Thrips tabaci (Thysanoptera: Thripidae).

Authors:  Lida Fekrat; Mohammad Zaki Aghl; Vahid Tahan
Journal:  J Econ Entomol       Date:  2015-05-04       Impact factor: 2.381

10.  Non-invasive genetic monitoring for the threatened valley elderberry longhorn beetle.

Authors:  Raman P Nagarajan; Alisha Goodbla; Emily Graves; Melinda Baerwald; Marcel Holyoak; Andrea Schreier
Journal:  PLoS One       Date:  2020-01-17       Impact factor: 3.240

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  4 in total

1.  Monitoring Exotic Beetles with Inexpensive Attractants: A Case Study.

Authors:  Enrico Ruzzier; Andrea Galli; Luciano Bani
Journal:  Insects       Date:  2021-05-17       Impact factor: 2.769

2.  Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method.

Authors:  Domenico Rizzo; Salvatore Moricca; Matteo Bracalini; Alessandra Benigno; Umberto Bernardo; Nicola Luchi; Daniele Da Lio; Francesco Nugnes; Giovanni Cappellini; Chiara Salemi; Santa Olga Cacciola; Tiziana Panzavolta
Journal:  Plants (Basel)       Date:  2021-05-22

3.  A diagnostic LAMP assay for rapid identification of an invasive plant pest, fall armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae).

Authors:  Arati Agarwal; Lea Rako; Mark K Schutze; Melissa L Starkie; Wee Tek Tay; Brendan C Rodoni; Mark J Blacket
Journal:  Sci Rep       Date:  2022-01-21       Impact factor: 4.996

4.  Characteristics of Trees Infested by the Invasive Primary Wood-Borer Aromia bungii (Coleoptera: Cerambycidae).

Authors:  Yuichi Yamamoto; Yosuke Ishikawa; Kazuhiko Uehara
Journal:  Insects       Date:  2022-01-04       Impact factor: 2.769

  4 in total

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