Literature DB >> 34067342

Rapid Detection of Pityophthorus juglandis (Blackman) (Coleoptera, Curculionidae) with the Loop-Mediated Isothermal Amplification (LAMP) Method.

Domenico Rizzo1, Salvatore Moricca2, Matteo Bracalini2, Alessandra Benigno2, Umberto Bernardo3, Nicola Luchi4, Daniele Da Lio5, Francesco Nugnes3, Giovanni Cappellini1, Chiara Salemi5, Santa Olga Cacciola6, Tiziana Panzavolta2.   

Abstract

The walnut twig beetle Pityophthorus juglandis is a phloem-boring bark beetle responsible, in association with the ascomycete Geosmithia morbida, for the Thousand Cankers Disease (TCD) of walnut trees. The recent finding of TCD in Europe prompted the development of effective diagnostic protocols for the early detection of members of this insect/fungus complex. Here we report the development of a highly efficient, low-cost, and rapid method for detecting the beetle, or even just its biological traces, from environmental samples: the loop-mediated isothermal amplification (LAMP) assay. The method, designed on the 28S ribosomal RNA gene, showed high specificity and sensitivity, with no cross reactivity to other bark beetles and wood-boring insects. The test was successful even with very small amounts of the target insect's nucleic acid, with limit values of 0.64 pg/µL and 3.2 pg/µL for WTB adults and frass, respectively. A comparison of the method (both in real time and visual) with conventional PCR did not display significant differences in terms of LoD. This LAMP protocol will enable quick, low-cost, and early detection of P. juglandis in areas with new infestations and for phytosanitary inspections at vulnerable sites (e.g., seaports, airports, loading stations, storage facilities, and wood processing companies).

Entities:  

Keywords:  bark beetle; invasive species; molecular identification; thousand canker disease; walnut

Year:  2021        PMID: 34067342     DOI: 10.3390/plants10061048

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  34 in total

1.  Geosmithia morbida sp. nov., a new phytopathogenic species living in symbiosis with the walnut twig beetle (Pityophthorus juglandis) on Juglans in USA.

Authors:  Miroslav Kolarík; Emily Freeland; Curtis Utley; Ned Tisserat
Journal:  Mycologia       Date:  2010-10-01       Impact factor: 2.696

2.  Susceptibility of Walnut and Hickory Species to Geosmithia morbida.

Authors:  Curtis Utley; Tivonne Nguyen; Tatiana Roubtsova; Mark Coggeshall; Tim M Ford; L J Grauke; Andrew D Graves; Charles A Leslie; James McKenna; Keith Woeste; Mohammad A Yaghmour; Steven J Seybold; Richard M Bostock; Ned Tisserat
Journal:  Plant Dis       Date:  2013-05       Impact factor: 4.438

3.  First Report of Geosmithia morbida on English Walnut and its Paradox Rootstock in California.

Authors:  M A Yaghmour; T L Nguyen; T V Roubtsova; J K Hasey; E J Fichtner; C DeBuse; S J Seybold; R M Bostock
Journal:  Plant Dis       Date:  2014-10       Impact factor: 4.438

4.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

5.  Molecular Detection of 10 of the Most Unwanted Alien Forest Pathogens in Canada Using Real-Time PCR.

Authors:  Josyanne Lamarche; Amélie Potvin; Gervais Pelletier; Don Stewart; Nicolas Feau; Dario I O Alayon; Angela L Dale; Aaron Coelho; Adnan Uzunovic; Guillaume J Bilodeau; Stephan C Brière; Richard C Hamelin; Philippe Tanguay
Journal:  PLoS One       Date:  2015-08-14       Impact factor: 3.240

6.  From laboratory to point of entry: development and implementation of a loop-mediated isothermal amplification (LAMP)-based genetic identification system to prevent introduction of quarantine insect species.

Authors:  Simon Blaser; Hanspeter Diem; Andreas von Felten; Morgan Gueuning; Michael Andreou; Neil Boonham; Jennifer Tomlinson; Pie Müller; Jürg Utzinger; Jürg E Frey; Andreas Bühlmann
Journal:  Pest Manag Sci       Date:  2018-03-12       Impact factor: 4.845

7.  Real-time loop-mediated isothermal amplification: an early-warning tool for quarantine plant pathogen detection.

Authors:  Chiara Aglietti; Nicola Luchi; Alessia Lucia Pepori; Paola Bartolini; Francesco Pecori; Aida Raio; Paolo Capretti; Alberto Santini
Journal:  AMB Express       Date:  2019-04-24       Impact factor: 3.298

8.  Application of the LAMP Assay as a Diagnostic Technique for Rapid Identification of Thrips tabaci (Thysanoptera: Thripidae).

Authors:  Lida Fekrat; Mohammad Zaki Aghl; Vahid Tahan
Journal:  J Econ Entomol       Date:  2015-05-04       Impact factor: 2.381

9.  Rapid identification of Bactrocera zonata (Dip.: Tephritidae) using TaqMan real-time PCR assay.

Authors:  Marzieh Koohkanzade; Mohammad Zakiaghl; Manpreet K Dhami; Lida Fekrat; Hussein Sadeghi Namaghi
Journal:  PLoS One       Date:  2018-10-04       Impact factor: 3.240

Review 10.  Loop-mediated isothermal amplification (LAMP): recent progress in research and development.

Authors:  Yasuyoshi Mori; Hidetoshi Kanda; Tsugunori Notomi
Journal:  J Infect Chemother       Date:  2013-03-29       Impact factor: 2.211

View more
  2 in total

1.  Loop-Mediated Isothermal Amplification (LAMP) and SYBR Green qPCR for Fast and Reliable Detection of Geosmithia morbida (Kolařik) in Infected Walnut.

Authors:  Domenico Rizzo; Chiara Aglietti; Alessandra Benigno; Matteo Bracalini; Daniele Da Lio; Linda Bartolini; Giovanni Cappellini; Antonio Aronadio; Cristina Francia; Nicola Luchi; Alberto Santini; Santa Olga Cacciola; Tiziana Panzavolta; Salvatore Moricca
Journal:  Plants (Basel)       Date:  2022-05-03

2.  Stilbocrea banihashemiana sp. nov. a New Fungal Pathogen Causing Stem Cankers and Twig Dieback of Fruit Trees.

Authors:  Zeinab Bolboli; Behnaz Tavakolian; Reza Mostowfizadeh-Ghalamfarsa; Moslem Jafari; Santa Olga Cacciola
Journal:  J Fungi (Basel)       Date:  2022-06-30
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.