Literature DB >> 33498436

Roles of the C-Terminal Amino Acids of Non-Hexameric Helicases: Insights from Escherichia coli UvrD.

Hiroaki Yokota1.   

Abstract

Helicases are nucleic acid-unwinding enzymes that are involved in the maintenance of genome integrity. Several parts of the amino acid sequences of helicases are very similar, and these quite well-conserved amino acid sequences are termed "helicase motifs". Previous studies by X-ray crystallography and single-molecule measurements have suggested a common underlying mechanism for their function. These studies indicate the role of the helicase motifs in unwinding nucleic acids. In contrast, the sequence and length of the C-terminal amino acids of helicases are highly variable. In this paper, I review past and recent studies that proposed helicase mechanisms and studies that investigated the roles of the C-terminal amino acids on helicase and dimerization activities, primarily on the non-hexermeric Escherichia coli (E. coli) UvrD helicase. Then, I center on my recent study of single-molecule direct visualization of a UvrD mutant lacking the C-terminal 40 amino acids (UvrDΔ40C) used in studies proposing the monomer helicase model. The study demonstrated that multiple UvrDΔ40C molecules jointly participated in DNA unwinding, presumably by forming an oligomer. Thus, the single-molecule observation addressed how the C-terminal amino acids affect the number of helicases bound to DNA, oligomerization, and unwinding activity, which can be applied to other helicases.

Entities:  

Keywords:  C-terminal amino acids; enzyme function; helicase; protein assemblies; protein–nucleic acid interactions; single-molecule fluorescence imaging

Mesh:

Substances:

Year:  2021        PMID: 33498436      PMCID: PMC7864180          DOI: 10.3390/ijms22031018

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  60 in total

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6.  Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase.

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7.  Single-molecule imaging of the oligomer formation of the nonhexameric Escherichia coli UvrD helicase.

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Journal:  Biochemistry       Date:  2010-06-01       Impact factor: 3.162

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  2 in total

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Journal:  Viruses       Date:  2022-08-03       Impact factor: 5.818

  2 in total

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