Literature DB >> 33496574

Structure Database and In Silico Spectral Library for Comprehensive Suspect Screening of Per- and Polyfluoroalkyl Substances (PFASs) in Environmental Media by High-resolution Mass Spectrometry.

Gordon J Getzinger1, Christopher P Higgins2, P Lee Ferguson1.   

Abstract

Per and polyfluoroalkyl substances (PFASs) are an important class of organic pollutants. Many diverse PFASs are used in commerce and most are not amenable to conventional targeted chemical analysis due to lack of reference standards. Therefore, methods for elucidating the chemical structure of previously unreported or unexpected PFASs in the environment rely extensively on high-resolution mass spectrometry (HRMS). High-throughput structure identification by HRMS is hindered by a lack of PFAS molecular databases and tandem mass spectral libraries. Here, we report a new approach for generating an environmentally relevant PFAS molecular database constructed from curated structure lists and biotic/abiotic in silico predicted transformation products. Further, we have generated a predicted tandem mass spectral library using computational mass spectrometry tools. Results demonstrate the utility of the generated database and approach for identifying PFASs in HRMS-enabled suspect- and nontarget screening studies.

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Year:  2021        PMID: 33496574      PMCID: PMC8011993          DOI: 10.1021/acs.analchem.0c04109

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  36 in total

1.  MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation.

Authors:  Laurent Gatto; Kathryn S Lilley
Journal:  Bioinformatics       Date:  2011-11-22       Impact factor: 6.937

2.  MassBank: a public repository for sharing mass spectral data for life sciences.

Authors:  Hisayuki Horai; Masanori Arita; Shigehiko Kanaya; Yoshito Nihei; Tasuku Ikeda; Kazuhiro Suwa; Yuya Ojima; Kenichi Tanaka; Satoshi Tanaka; Ken Aoshima; Yoshiya Oda; Yuji Kakazu; Miyako Kusano; Takayuki Tohge; Fumio Matsuda; Yuji Sawada; Masami Yokota Hirai; Hiroki Nakanishi; Kazutaka Ikeda; Naoshige Akimoto; Takashi Maoka; Hiroki Takahashi; Takeshi Ara; Nozomu Sakurai; Hideyuki Suzuki; Daisuke Shibata; Steffen Neumann; Takashi Iida; Ken Tanaka; Kimito Funatsu; Fumito Matsuura; Tomoyoshi Soga; Ryo Taguchi; Kazuki Saito; Takaaki Nishioka
Journal:  J Mass Spectrom       Date:  2010-07       Impact factor: 1.982

3.  Aerobic biodegradation of 2 fluorotelomer sulfonamide-based aqueous film-forming foam components produces perfluoroalkyl carboxylates.

Authors:  Lisa A D'Agostino; Scott A Mabury
Journal:  Environ Toxicol Chem       Date:  2017-03-09       Impact factor: 3.742

4.  Nontargeted mass-spectral detection of chloroperfluoropolyether carboxylates in New Jersey soils.

Authors:  John W Washington; Charlita G Rosal; James P McCord; Mark J Strynar; Andrew B Lindstrom; Erica L Bergman; Sandra M Goodrow; Haile K Tadesse; Andrew N Pilant; Benjamin J Washington; Mary J Davis; Brittany G Stuart; Thomas M Jenkins
Journal:  Science       Date:  2020-06-05       Impact factor: 47.728

5.  Transformation of novel polyfluoroalkyl substances (PFASs) as co-contaminants during biopile remediation of petroleum hydrocarbons.

Authors:  Rui Li; Gabriel Munoz; Yanan Liu; Sébastien Sauvé; Subhasis Ghoshal; Jinxia Liu
Journal:  J Hazard Mater       Date:  2018-09-07       Impact factor: 10.588

6.  Degradation and defluorination of 6:2 fluorotelomer sulfonamidoalkyl betaine and 6:2 fluorotelomer sulfonate by Gordonia sp. strain NB4-1Y under sulfur-limiting conditions.

Authors:  Dayton M J Shaw; Gabriel Munoz; Eric M Bottos; Sung Vo Duy; Sébastien Sauvé; Jinxia Liu; Jonathan D Van Hamme
Journal:  Sci Total Environ       Date:  2018-08-03       Impact factor: 7.963

7.  Discovery of 40 Classes of Per- and Polyfluoroalkyl Substances in Historical Aqueous Film-Forming Foams (AFFFs) and AFFF-Impacted Groundwater.

Authors:  Krista A Barzen-Hanson; Simon C Roberts; Sarah Choyke; Karl Oetjen; Alan McAlees; Nicole Riddell; Robert McCrindle; P Lee Ferguson; Christopher P Higgins; Jennifer A Field
Journal:  Environ Sci Technol       Date:  2017-02-02       Impact factor: 9.028

8.  Trends in exposure to polyfluoroalkyl chemicals in the U.S. Population: 1999-2008.

Authors:  Kayoko Kato; Lee-Yang Wong; Lily T Jia; Zsuzsanna Kuklenyik; Antonia M Calafat
Journal:  Environ Sci Technol       Date:  2011-04-06       Impact factor: 9.028

9.  Indoor sources of poly- and perfluorinated compounds (PFCS) in Vancouver, Canada: implications for human exposure.

Authors:  Mahiba Shoeib; Tom Harner; Glenys M Webster; Sum Chi Lee
Journal:  Environ Sci Technol       Date:  2011-02-18       Impact factor: 9.028

10.  Oxidative conversion as a means of detecting precursors to perfluoroalkyl acids in urban runoff.

Authors:  Erika F Houtz; David L Sedlak
Journal:  Environ Sci Technol       Date:  2012-08-17       Impact factor: 9.028

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  3 in total

1.  FindPFΔS: Non-Target Screening for PFAS─Comprehensive Data Mining for MS2 Fragment Mass Differences.

Authors:  Jonathan Zweigle; Boris Bugsel; Christian Zwiener
Journal:  Anal Chem       Date:  2022-07-22       Impact factor: 8.008

Review 2.  Communicating Confidence of Per- and Polyfluoroalkyl Substance Identification via High-Resolution Mass Spectrometry.

Authors:  Joseph A Charbonnet; Carrie A McDonough; Feng Xiao; Trever Schwichtenberg; Dunping Cao; Sarit Kaserzon; Kevin V Thomas; Pradeep Dewapriya; Benjamin J Place; Emma L Schymanski; Jennifer A Field; Damian E Helbling; Christopher P Higgins
Journal:  Environ Sci Technol Lett       Date:  2022-05-26

Review 3.  Environmental Sources, Chemistry, Fate, and Transport of Per- and Polyfluoroalkyl Substances: State of the Science, Key Knowledge Gaps, and Recommendations Presented at the August 2019 SETAC Focus Topic Meeting.

Authors:  Jennifer L Guelfo; Stephen Korzeniowski; Marc A Mills; Janet Anderson; Richard H Anderson; Jennifer A Arblaster; Jason M Conder; Ian T Cousins; Kavitha Dasu; Barbara J Henry; Linda S Lee; Jinxia Liu; Erica R McKenzie; Janice Willey
Journal:  Environ Toxicol Chem       Date:  2021-10-21       Impact factor: 4.218

  3 in total

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