Literature DB >> 33496265

The diversity and function of sourdough starter microbiomes.

Elizabeth A Landis1, Angela M Oliverio2,3, Erin A McKenney4,5, Lauren M Nichols4, Nicole Kfoury6, Megan Biango-Daniels1, Leonora K Shell4, Anne A Madden4, Lori Shapiro4, Shravya Sakunala1, Kinsey Drake1, Albert Robbat6, Matthew Booker7, Robert R Dunn4,8, Noah Fierer2,3, Benjamin E Wolfe1.   

Abstract

Humans have relied on sourdough starter microbial communities to make leavened bread for thousands of years, but only a small fraction of global sourdough biodiversity has been characterized. Working with a community-scientist network of bread bakers, we determined the microbial diversity of 500 sourdough starters from four continents. In sharp contrast with widespread assumptions, we found little evidence for biogeographic patterns in starter communities. Strong co-occurrence patterns observed in situ and recreated in vitro demonstrate that microbial interactions shape sourdough community structure. Variation in dough rise rates and aromas were largely explained by acetic acid bacteria, a mostly overlooked group of sourdough microbes. Our study reveals the extent of microbial diversity in an ancient fermented food across diverse cultural and geographic backgrounds.
© 2021, Landis et al.

Entities:  

Keywords:  bacteria; ecology; fungi; infectious disease; microbial community; microbiology; none; sourdough

Mesh:

Substances:

Year:  2021        PMID: 33496265      PMCID: PMC7837699          DOI: 10.7554/eLife.61644

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  54 in total

1.  Influence of geographical origin and flour type on diversity of lactic acid bacteria in traditional Belgian sourdoughs.

Authors:  Ilse Scheirlinck; Roel Van der Meulen; Ann Van Schoor; Marc Vancanneyt; Luc De Vuyst; Peter Vandamme; Geert Huys
Journal:  Appl Environ Microbiol       Date:  2007-08-03       Impact factor: 4.792

Review 2.  How the sourdough may affect the functional features of leavened baked goods.

Authors:  Marco Gobbetti; Carlo G Rizzello; Raffaella Di Cagno; Maria De Angelis
Journal:  Food Microbiol       Date:  2013-05-16       Impact factor: 5.516

Review 3.  Software techniques for two- and three-dimensional kinematic measurements of biological and biomimetic systems.

Authors:  Tyson L Hedrick
Journal:  Bioinspir Biomim       Date:  2008-07-01       Impact factor: 2.956

Review 4.  Simple organizing principles in microbial communities.

Authors:  Nicole M Vega; Jeff Gore
Journal:  Curr Opin Microbiol       Date:  2018-11-29       Impact factor: 7.934

5.  Optimizing targeted/untargeted metabolomics by automating gas chromatography/mass spectrometry workflows.

Authors:  Albert Robbat; Nicole Kfoury; Eugene Baydakov; Yuriy Gankin
Journal:  J Chromatogr A       Date:  2017-05-08       Impact factor: 4.759

6.  ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts.

Authors:  M Gardes; T D Bruns
Journal:  Mol Ecol       Date:  1993-04       Impact factor: 6.185

7.  Microorganisms of the San Francisco sour dough bread process. I. Yeasts responsible for the leavening action.

Authors:  T F Sugihara; L Kline; M W Miller
Journal:  Appl Microbiol       Date:  1971-03

8.  The sourdough microflora. Interactions between lactic acid bacteria and yeasts: metabolism of amino acids.

Authors:  M Gobbetti; A Corsetti; J Rossi
Journal:  World J Microbiol Biotechnol       Date:  1994-05       Impact factor: 3.312

9.  Distinct Biogeographic Patterns for Archaea, Bacteria, and Fungi along the Vegetation Gradient at the Continental Scale in Eastern China.

Authors:  Bin Ma; Zhongmin Dai; Haizhen Wang; Melissa Dsouza; Xingmei Liu; Yan He; Jianjun Wu; Jorge L M Rodrigues; Jack A Gilbert; Philip C Brookes; Jianming Xu
Journal:  mSystems       Date:  2017-02-07       Impact factor: 6.496

10.  Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves.

Authors:  Kathleen Sprouffske; Andreas Wagner
Journal:  BMC Bioinformatics       Date:  2016-04-19       Impact factor: 3.169

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  9 in total

1.  Evaluation of the variations in chemical and microbiological properties of the sourdoughs produced with selected lactic acid bacteria strains during fermentation.

Authors:  Cennet Pelin Boyaci Gunduz; Bilal Agirman; Raimondo Gaglio; Elena Franciosi; Nicola Francesca; Luca Settanni; Huseyin Erten
Journal:  Food Chem X       Date:  2022-06-03

2.  Screening of Sourdough Starter Strains and Improvements in the Quality of Whole Wheat Steamed Bread.

Authors:  Juan Shen; Kexin Shi; Hua Dong; Kesheng Yang; Zhaoxin Lu; Fengxia Lu; Pei Wang
Journal:  Molecules       Date:  2022-05-30       Impact factor: 4.927

Review 3.  Experimental systems biology approaches reveal interaction mechanisms in model multispecies communities.

Authors:  Anupama Khare
Journal:  Trends Microbiol       Date:  2021-04-14       Impact factor: 17.079

4.  Mechanistic Insight into Yeast Bloom in a Lactic Acid Bacteria Relaying-Community in the Start of Sourdough Microbiota Evolution.

Authors:  Mugihito Oshiro; Masaru Tanaka; Rie Momoda; Takeshi Zendo; Jiro Nakayama
Journal:  Microbiol Spectr       Date:  2021-10-20

5.  Impact of Leavening Agent and Wheat Variety on Bread Organoleptic and Nutritional Quality.

Authors:  Lauriane Mietton; Marie-Françoise Samson; Thérèse Marlin; Teddy Godet; Valérie Nolleau; Stéphane Guezenec; Diego Segond; Thibault Nidelet; Dominique Desclaux; Delphine Sicard
Journal:  Microorganisms       Date:  2022-07-14

6.  Breaking Barriers with Bread: Using the Sourdough Starter Microbiome to Teach High-Throughput Sequencing Techniques.

Authors:  Benjamin H Holt; Alison Buchan; Jennifer M DeBruyn; Heidi Goodrich-Blair; Elizabeth McPherson; Veronica A Brown
Journal:  J Microbiol Biol Educ       Date:  2022-05-16

Review 7.  Role of lactic acid bacteria and yeasts in sourdough fermentation during breadmaking: Evaluation of postbiotic-like components and health benefits.

Authors:  Omar Pérez-Alvarado; Andrea Zepeda-Hernández; Luis Eduardo Garcia-Amezquita; Teresa Requena; Gabriel Vinderola; Tomás García-Cayuela
Journal:  Front Microbiol       Date:  2022-09-08       Impact factor: 6.064

8.  Microbial Composition of SCOBY Starter Cultures Used by Commercial Kombucha Brewers in North America.

Authors:  Keisha Harrison; Chris Curtin
Journal:  Microorganisms       Date:  2021-05-14

9.  Fluctuating Environments Maintain Genetic Diversity through Neutral Fitness Effects and Balancing Selection.

Authors:  Farah Abdul-Rahman; Daniel Tranchina; David Gresham
Journal:  Mol Biol Evol       Date:  2021-09-27       Impact factor: 16.240

  9 in total

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