Literature DB >> 33490549

Characterization of the complete mitochondrial genome of the common smoothhound shark, Mustelus mustelus (Carcharhiniformes: Triakidae).

Kelvin L Hull1, Simo N Maduna1, Aletta E Bester-van der Merwe1.   

Abstract

We present the complete mitochondrial genome of the common smoothhound , Mustelus mustelus,which is 16,755 bp long, contains 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and non-coding control region. All protein-coding genes begin with the ATG codon, except for the COI gene, which begins with GTG. Six protein-coding genes terminated with the TAA codon, and six with incomplete codons, T or TA. The phylogenetic reconstruction places M. mustelus within the genus Mustelus, with the closest relationship to the placental species, M. griseus. This mitogenome provides valuable information to further unravel the evolution of alternate reproductive modes within the genus.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Carcharhiniformes; Mustelus mustelus; mitogenome; phylogenetic analysis; smoothhound

Year:  2018        PMID： 33490549      PMCID： PMC7800274          DOI： 10.1080/23802359.2018.1507642

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  8 in total

1.  jModelTest 2: more models, new heuristics and parallel computing.

Authors:  Diego Darriba; Guillermo L Taboada; Ramón Doallo; David Posada
Journal:  Nat Methods       Date:  2012-07-30       Impact factor: 28.547

2.  Annotated checklist of the living sharks, batoids and chimaeras (Chondrichthyes) of the world, with a focus on biogeographical diversity.

Authors:  S Weigmann
Journal:  J Fish Biol       Date:  2016-02-10       Impact factor: 2.051

3.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

4.  Mitochondrial genome of the spotless smooth-hound Mustelus griseus (Carcharhiniformes: Triakidae).

Authors:  Xiao Chen; Zaiqing Peng; Lianghao Pan; Xiaofang Shi; Ling Cai
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-01-17       Impact factor: 1.514

5.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

6.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

7.  MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline.

Authors:  Wataru Iwasaki; Tsukasa Fukunaga; Ryota Isagozawa; Koichiro Yamada; Yasunobu Maeda; Takashi P Satoh; Tetsuya Sado; Kohji Mabuchi; Hirohiko Takeshima; Masaki Miya; Mutsumi Nishida
Journal:  Mol Biol Evol       Date:  2013-08-16       Impact factor: 16.240

8.  Species identification and comparative population genetics of four coastal houndsharks based on novel NGS-mined microsatellites.

Authors:  Simo N Maduna; Charné Rossouw; Charlene da Silva; Michelle Soekoe; Aletta E Bester-van der Merwe
Journal:  Ecol Evol       Date:  2017-02-05       Impact factor: 2.912
  8 in total
  1 in total

1.  Complete Mitochondrial DNA Genome of Nine Species of Sharks and Rays and Their Phylogenetic Placement among Modern Elasmobranchs.

Authors:  Vasiliki Kousteni; Sofia Mazzoleni; Katerina Vasileiadou; Michail Rovatsos
Journal:  Genes (Basel)       Date:  2021-02-24       Impact factor: 4.096
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.