Literature DB >> 33490530

Complete mitochondrial DNA genome of grey pomfret Pampus cinereus (Bloch, 1795) (Perciformes: Stromateidae).

Shouqiang Wang1,2, Linlin Zhao2, Yuan Li3, Zhaohui Zhang2, Zongling Wang2, Tianxiang Gao4.   

Abstract

In this study, we sequenced the complete mitochondrial genome of Pampus cinereus (Bloch, 1795). This mitochondrial genome, consisting of 16,540 base pairs (bp), contains 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs, and two mainly noncoding regions (control region and origin of light-strand replication) as those found in other vertebrates. Control region with 846 bp in length, is located between tRNAPro and tRNAPhe. The overall base composition of the heavy strand shows 27.4% of T, 27.5% of C, 30.0% of A, and 15.2% of G, with a slight A + T rich bias (57.4%). The complete mitochondrial genome data will provide useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Pampus cinereus; Stromateidae; mitochondrial genome

Year:  2018        PMID： 33490530      PMCID： PMC7800252          DOI： 10.1080/23802359.2018.1481788

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  9 in total

1.  Organization of the Mitochondrial Genome of a Deep-Sea Fish, Gonostoma gracile (Teleostei: Stomiiformes): First Example of Transfer RNA Gene Rearrangements in Bony Fishes.

Authors: 
Journal:  Mar Biotechnol (NY)       Date:  1999-09       Impact factor: 3.619

2.  Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics.

Authors:  Zhaoxia Cui; Yuan Liu; Chi Pang Li; Ka Hou Chu
Journal:  Mol Biol Rep       Date:  2010-06-24       Impact factor: 2.316

3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

4.  Complete mitochondrial genome of Sicyopterus japonicus (Perciformes, Gobiidae).

Authors:  Tzen-Yuh Chiang; I-Shiung Chen; Hung-Du Lin; Wen-Been Chang; Yu-Min Ju
Journal:  Mitochondrial DNA       Date:  2013-01-14

5.  Complete mitochondrial genome sequence of bighead croaker Collichthys niveatus (Perciformes, Sciaenidae): a mitogenomic perspective on the phylogenetic relationships of Pseudosciaeniae.

Authors:  Jiao Cheng; Guo-qiang Ma; Na Song; Tian-xiang Gao
Journal:  Gene       Date:  2011-10-01       Impact factor: 3.688

6.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

7.  The complete mitochondrial genome of Chinese sucker Myxocyprinus asiaticus (Cypriniformes, Catostomidae).

Authors:  I-Shiung Chen
Journal:  Mitochondrial DNA       Date:  2013-04-02

8.  Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): insight into its phylogenic position within Cyprinidae.

Authors:  Chenghui Wang; Qin Chen; Guoqing Lu; Jiawei Xu; Qinling Yang; Sifa Li
Journal:  Gene       Date:  2008-07-18       Impact factor: 3.688

9.  The complete mitochondrial genome of the large yellow croaker, Larimichthys crocea (Perciformes, Sciaenidae): unusual features of its control region and the phylogenetic position of the Sciaenidae.

Authors:  Zhaoxia Cui; Yuan Liu; Chi Pang Li; Feng You; Ka Hou Chu
Journal:  Gene       Date:  2008-12-03       Impact factor: 3.688
  9 in total

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