Literature DB >> 33490103

A Novel Prognostic Model of Endometrial Carcinoma Based on Clinical Variables and Oncogenomic Gene Signature.

Fang Deng1, Jing Mu1, Chiwen Qu2, Fang Yang1, Xing Liu1, Xiaomin Zeng1, Xiaoning Peng2,3,4.   

Abstract

Due to the difficulty in predicting the prognosis of endometrial carcinoma (EC) patients by clinical variables alone, this study aims to build a new EC prognosis model integrating clinical and molecular information, so as to improve the accuracy of predicting the prognosis of EC. The clinical and gene expression data of 496 EC patients in the TCGA database were used to establish and validate this model. General Cox regression was applied to analyze clinical variables and RNAs. Elastic net-penalized Cox proportional hazard regression was employed to select the best EC prognosis-related RNAs, and ridge regression was used to construct the EC prognostic model. The predictive ability of the prognostic model was evaluated by the Kaplan-Meier curve and the area under the receiver operating characteristic curve (AUC-ROC). A clinical-RNA prognostic model integrating two clinical variables and 28 RNAs was established. The 5-year AUC of the clinical-RNA prognostic model was 0.932, which is higher than that of the clinical-alone (0.897) or RNA-alone prognostic model (0.836). This clinical-RNA prognostic model can better classify the prognosis risk of EC patients. In the training group (396 patients), the overall survival of EC patients was lower in the high-risk group than in the low-risk group [HR = 32.263, (95% CI, 7.707-135.058), P = 8e-14]. The same comparison result was also observed for the validation group. A novel EC prognosis model integrating clinical variables and RNAs was established, which can better predict the prognosis and help to improve the clinical management of EC patients.
Copyright © 2021 Deng, Mu, Qu, Yang, Liu, Zeng and Peng.

Entities:  

Keywords:  cancer genomics; endometrial carcinoma; integrative model; prognosis; the Cancer Genome Atlas (TCGA)

Year:  2021        PMID: 33490103      PMCID: PMC7817972          DOI: 10.3389/fmolb.2020.587822

Source DB:  PubMed          Journal:  Front Mol Biosci        ISSN: 2296-889X


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