Literature DB >> 33489900

Identification of Iron Metabolism-Related Gene Signatures for Predicting the Prognosis of Patients With Sarcomas.

Jianyi Li1, Chuan Hu1, Yukun Du1, Xiaojie Tang1,2, Cheng Shao1, Tongshuai Xu1, Zheng Zhao1, Huiqiang Hu1, Yingyi Sheng1, Jianwei Guo1, Yongming Xi1.   

Abstract

Iron is one of the essential trace elements in the human body. An increasing amount of evidence indicates that the imbalance of iron metabolism is related to the occurrence and development of cancer. Here, we obtained the gene expression and clinical data of sarcoma patients from TCGA and the GEO database. The prognostic value of iron metabolism-related genes (IMRGs) in patients with sarcoma and the relationship between these genes and the immune microenvironment were studied by comprehensive bioinformatics analyses. Two signatures based on IMRGs were generated for the overall survival (OS) and disease-free survival (DFS) of sarcoma patients. At 3, 5, and 7 years, the areas under the curve (AUCs) of the OS signature were 0.708, 0.713, and 0.688, respectively. The AUCs of the DFS signature at 3, 5, and 7 years were 0.717, 0.689, and 0.702, respectively. Kaplan-Meier survival analysis indicated that the prognosis of high-risk patients was worse than that of low-risk patients. In addition, immunological analysis showed that there were different patterns of immune cell infiltration among patients in different clusters. Finally, we constructed two nomograms that can be used to predict the OS and DFS of sarcoma patients. The C-index was 0.766 (95% CI: 0.697-0.835) and 0.763 (95% CI: 0.706-0.820) for the OS and DFS nomograms, respectively. Both the ROC curves and the calibration plots showed that the two nomograms have good predictive performance. In summary, we constructed two IMRG-based prognostic models that can effectively predict the OS and DFS of sarcoma patients.
Copyright © 2021 Li, Hu, Du, Tang, Shao, Xu, Zhao, Hu, Sheng, Guo and Xi.

Entities:  

Keywords:  The Cancer Genome Atlas (TCGA); iron metabolism-related genes; nomogram; prognostic signature; sarcoma

Year:  2021        PMID: 33489900      PMCID: PMC7817539          DOI: 10.3389/fonc.2020.599816

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   6.244


  37 in total

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