Literature DB >> 33488543

Wine Terroir and the Soil Bacteria: An Amplicon Sequencing-Based Assessment of the Barossa Valley and Its Sub-Regions.

Jia Zhou1, Timothy R Cavagnaro1, Roberta De Bei1, Tiffanie M Nelson2, John R Stephen1, Andrew Metcalfe3, Matthew Gilliham1,4, James Breen5,6,7, Cassandra Collins1,4, Carlos M Rodríguez López8.   

Abstract

A wines' terroir, represented as wine traits with regional distinctiveness, is a reflection of both the biophysical and human-driven conditions in which the grapes were grown and wine made. Soil is an important factor contributing to the uniqueness of a wine produced by vines grown in specific conditions. Here, we evaluated the impact of environmental variables on the soil bacteria of 22 Barossa Valley vineyard sites based on the 16S rRNA gene hypervariable region 4. In this study, we report that both dispersal isolation by geographic distance and environmental heterogeneity (soil plant-available P content, elevation, rainfall, temperature, spacing between row and spacing between vine) contribute to microbial community dissimilarity between vineyards. Vineyards located in cooler and wetter regions showed lower beta diversity and a higher ratio of dominant taxa. Differences in soil bacterial community composition were significantly associated with differences in fruit and wine composition. Our results suggest that environmental factors affecting wine terroir, may be mediated by changes in microbial structure, thus providing a basic understanding of how growing conditions affect interactions between plants and their soil bacteria.
Copyright © 2021 Zhou, Cavagnaro, De Bei, Nelson, Stephen, Metcalfe, Gilliham, Breen, Collins and Rodríguez López.

Entities:  

Keywords:  16SrRNA; Barossa Valley; Illumina; soil microbiome; terroir; vineyard soil bacteria

Year:  2021        PMID: 33488543      PMCID: PMC7817890          DOI: 10.3389/fmicb.2020.597944

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  61 in total

1.  Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils.

Authors:  Martina S Girvan; Juliet Bullimore; Jules N Pretty; A Mark Osborn; Andrew S Ball
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

2.  Effects of soil type and farm management on soil ecological functional genes and microbial activities.

Authors:  Jennifer R Reeve; Christopher W Schadt; Lynne Carpenter-Boggs; Sanghoon Kang; Jizhong Zhou; John P Reganold
Journal:  ISME J       Date:  2010-04-08       Impact factor: 10.302

3.  Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.

Authors:  T Z DeSantis; P Hugenholtz; N Larsen; M Rojas; E L Brodie; K Keller; T Huber; D Dalevi; P Hu; G L Andersen
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

4.  Root exudates regulate soil fungal community composition and diversity.

Authors:  Corey D Broeckling; Amanda K Broz; Joy Bergelson; Daniel K Manter; Jorge M Vivanco
Journal:  Appl Environ Microbiol       Date:  2007-12-14       Impact factor: 4.792

5.  Turnover of soil bacterial diversity driven by wide-scale environmental heterogeneity.

Authors:  L Ranjard; S Dequiedt; N Chemidlin Prévost-Bouré; J Thioulouse; N P A Saby; M Lelievre; P A Maron; F E R Morin; A Bispo; C Jolivet; D Arrouays; P Lemanceau
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Is microbial terroir related to geographic distance between vineyards?

Authors:  Toshiko Miura; Roland Sánchez; Luis E Castañeda; Karina Godoy; Olga Barbosa
Journal:  Environ Microbiol Rep       Date:  2017-10-13       Impact factor: 3.541

7.  Dynamics of soil bacterial communities in response to repeated application of manure containing sulfadiazine.

Authors:  Guo-Chun Ding; Viviane Radl; Brigitte Schloter-Hai; Sven Jechalke; Holger Heuer; Kornelia Smalla; Michael Schloter
Journal:  PLoS One       Date:  2014-03-26       Impact factor: 3.240

8.  pH is the primary determinant of the bacterial community structure in agricultural soils impacted by polycyclic aromatic hydrocarbon pollution.

Authors:  Yucheng Wu; Jun Zeng; Qinghe Zhu; Zhenfa Zhang; Xiangui Lin
Journal:  Sci Rep       Date:  2017-01-04       Impact factor: 4.379

9.  Normalization and microbial differential abundance strategies depend upon data characteristics.

Authors:  Sophie Weiss; Zhenjiang Zech Xu; Shyamal Peddada; Amnon Amir; Kyle Bittinger; Antonio Gonzalez; Catherine Lozupone; Jesse R Zaneveld; Yoshiki Vázquez-Baeza; Amanda Birmingham; Embriette R Hyde; Rob Knight
Journal:  Microbiome       Date:  2017-03-03       Impact factor: 14.650

10.  Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming.

Authors:  Kyle Hartman; Marcel G A van der Heijden; Raphaël A Wittwer; Samiran Banerjee; Jean-Claude Walser; Klaus Schlaeppi
Journal:  Microbiome       Date:  2018-01-16       Impact factor: 14.650

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  1 in total

1.  A global microbiome survey of vineyard soils highlights the microbial dimension of viticultural terroirs.

Authors:  Ignacio Belda; Lars H Hansen; Alex Gobbi; Alberto Acedo; Nabeel Imam; Rui G Santini; Rüdiger Ortiz-Álvarez; Lea Ellegaard-Jensen
Journal:  Commun Biol       Date:  2022-03-18
  1 in total

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