Literature DB >> 33481773

Predictions of COVID-19 dynamics in the UK: Short-term forecasting and analysis of potential exit strategies.

Matt J Keeling1, Edward M Hill1, Erin E Gorsich1, Bridget Penman1, Glen Guyver-Fletcher1,2, Alex Holmes1,3, Trystan Leng1,3, Hector McKimm1,4, Massimiliano Tamborrino1,4, Louise Dyson1, Michael J Tildesley1.   

Abstract

Efforts to suppress transmission of SARS-CoV-2 in the UK have seen non-pharmaceutical interventions being invoked. The most severe measures to date include all restaurants, pubs and cafes being ordered to close on 20th March, followed by a "stay at home" order on the 23rd March and the closure of all non-essential retail outlets for an indefinite period. Government agencies are presently analysing how best to develop an exit strategy from these measures and to determine how the epidemic may progress once measures are lifted. Mathematical models are currently providing short and long term forecasts regarding the future course of the COVID-19 outbreak in the UK to support evidence-based policymaking. We present a deterministic, age-structured transmission model that uses real-time data on confirmed cases requiring hospital care and mortality to provide up-to-date predictions on epidemic spread in ten regions of the UK. The model captures a range of age-dependent heterogeneities, reduced transmission from asymptomatic infections and produces a good fit to the key epidemic features over time. We simulated a suite of scenarios to assess the impact of differing approaches to relaxing social distancing measures from 7th May 2020 on the estimated number of patients requiring inpatient and critical care treatment, and deaths. With regard to future epidemic outcomes, we investigated the impact of reducing compliance, ongoing shielding of elder age groups, reapplying stringent social distancing measures using region based triggers and the role of asymptomatic transmission. We find that significant relaxation of social distancing measures from 7th May onwards can lead to a rapid resurgence of COVID-19 disease and the health system being quickly overwhelmed by a sizeable, second epidemic wave. In all considered age-shielding based strategies, we projected serious demand on critical care resources during the course of the pandemic. The reintroduction and release of strict measures on a regional basis, based on ICU bed occupancy, results in a long epidemic tail, until the second half of 2021, but ensures that the health service is protected by reintroducing social distancing measures for all individuals in a region when required. Our work confirms the effectiveness of stringent non-pharmaceutical measures in March 2020 to suppress the epidemic. It also provides strong evidence to support the need for a cautious, measured approach to relaxation of lockdown measures, to protect the most vulnerable members of society and support the health service through subduing demand on hospital beds, in particular bed occupancy in intensive care units.

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Year:  2021        PMID: 33481773      PMCID: PMC7857604          DOI: 10.1371/journal.pcbi.1008619

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  21 in total

Review 1.  Using social and behavioural science to support COVID-19 pandemic response.

Authors:  Jay J Van Bavel; Katherine Baicker; Paulo S Boggio; Valerio Capraro; Aleksandra Cichocka; Mina Cikara; Molly J Crockett; Alia J Crum; Karen M Douglas; James N Druckman; John Drury; Oeindrila Dube; Naomi Ellemers; Eli J Finkel; James H Fowler; Michele Gelfand; Shihui Han; S Alexander Haslam; Jolanda Jetten; Shinobu Kitayama; Dean Mobbs; Lucy E Napper; Dominic J Packer; Gordon Pennycook; Ellen Peters; Richard E Petty; David G Rand; Stephen D Reicher; Simone Schnall; Azim Shariff; Linda J Skitka; Sandra Susan Smith; Cass R Sunstein; Nassim Tabri; Joshua A Tucker; Sander van der Linden; Paul van Lange; Kim A Weeden; Michael J A Wohl; Jamil Zaki; Sean R Zion; Robb Willer
Journal:  Nat Hum Behav       Date:  2020-04-30

2.  Shielding from covid-19 should be stratified by risk.

Authors:  George Davey Smith; David Spiegelhalter
Journal:  BMJ       Date:  2020-05-28

3.  Adaptive management and the value of information: learning via intervention in epidemiology.

Authors:  Katriona Shea; Michael J Tildesley; Michael C Runge; Christopher J Fonnesbeck; Matthew J Ferrari
Journal:  PLoS Biol       Date:  2014-10-21       Impact factor: 8.029

4.  Clinical Characteristics of Coronavirus Disease 2019 in China.

Authors:  Wei-Jie Guan; Zheng-Yi Ni; Yu Hu; Wen-Hua Liang; Chun-Quan Ou; Jian-Xing He; Lei Liu; Hong Shan; Chun-Liang Lei; David S C Hui; Bin Du; Lan-Juan Li; Guang Zeng; Kwok-Yung Yuen; Ru-Chong Chen; Chun-Li Tang; Tao Wang; Ping-Yan Chen; Jie Xiang; Shi-Yue Li; Jin-Lin Wang; Zi-Jing Liang; Yi-Xiang Peng; Li Wei; Yong Liu; Ya-Hua Hu; Peng Peng; Jian-Ming Wang; Ji-Yang Liu; Zhong Chen; Gang Li; Zhi-Jian Zheng; Shao-Qin Qiu; Jie Luo; Chang-Jiang Ye; Shao-Yong Zhu; Nan-Shan Zhong
Journal:  N Engl J Med       Date:  2020-02-28       Impact factor: 91.245

5.  Projecting social contact matrices in 152 countries using contact surveys and demographic data.

Authors:  Kiesha Prem; Alex R Cook; Mark Jit
Journal:  PLoS Comput Biol       Date:  2017-09-12       Impact factor: 4.475

6.  A Novel Coronavirus from Patients with Pneumonia in China, 2019.

Authors:  Na Zhu; Dingyu Zhang; Wenling Wang; Xingwang Li; Bo Yang; Jingdong Song; Xiang Zhao; Baoying Huang; Weifeng Shi; Roujian Lu; Peihua Niu; Faxian Zhan; Xuejun Ma; Dayan Wang; Wenbo Xu; Guizhen Wu; George F Gao; Wenjie Tan
Journal:  N Engl J Med       Date:  2020-01-24       Impact factor: 91.245

7.  The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study.

Authors:  Kiesha Prem; Yang Liu; Timothy W Russell; Adam J Kucharski; Rosalind M Eggo; Nicholas Davies; Mark Jit; Petra Klepac
Journal:  Lancet Public Health       Date:  2020-03-25

8.  Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing.

Authors:  Luca Ferretti; Chris Wymant; David Bonsall; Christophe Fraser; Michelle Kendall; Lele Zhao; Anel Nurtay; Lucie Abeler-Dörner; Michael Parker
Journal:  Science       Date:  2020-03-31       Impact factor: 47.728

9.  Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV-2).

Authors:  Ruiyun Li; Sen Pei; Bin Chen; Yimeng Song; Tao Zhang; Wan Yang; Jeffrey Shaman
Journal:  Science       Date:  2020-03-16       Impact factor: 47.728

10.  Early dynamics of transmission and control of COVID-19: a mathematical modelling study.

Authors:  Adam J Kucharski; Timothy W Russell; Charlie Diamond; Yang Liu; John Edmunds; Sebastian Funk; Rosalind M Eggo
Journal:  Lancet Infect Dis       Date:  2020-03-11       Impact factor: 25.071

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  20 in total

1.  An assessment of the vaccination of school-aged children in England against SARS-CoV-2.

Authors:  Matt J Keeling; Sam E Moore
Journal:  BMC Med       Date:  2022-05-18       Impact factor: 11.150

2.  COVID-19 transmission dynamics underlying epidemic waves in Kenya.

Authors:  Samuel P C Brand; John Ojal; Rabia Aziza; Vincent Were; Emelda A Okiro; Ivy K Kombe; Caroline Mburu; Morris Ogero; Ambrose Agweyu; George M Warimwe; James Nyagwange; Henry Karanja; John N Gitonga; Daisy Mugo; Sophie Uyoga; Ifedayo M O Adetifa; J Anthony G Scott; Edward Otieno; Nickson Murunga; Mark Otiende; Lynette I Ochola-Oyier; Charles N Agoti; George Githinji; Kadondi Kasera; Patrick Amoth; Mercy Mwangangi; Rashid Aman; Wangari Ng'ang'a; Benjamin Tsofa; Philip Bejon; Matt J Keeling; D James Nokes; Edwine Barasa
Journal:  Science       Date:  2021-10-07       Impact factor: 47.728

3.  The effectiveness of social bubbles as part of a Covid-19 lockdown exit strategy, a modelling study.

Authors:  Trystan Leng; Connor White; Joe Hilton; Adam Kucharski; Lorenzo Pellis; Helena Stage; Nicholas G Davies; Matt J Keeling; Stefan Flasche
Journal:  Wellcome Open Res       Date:  2021-03-29

4.  Modelling optimal vaccination strategy for SARS-CoV-2 in the UK.

Authors:  Sam Moore; Edward M Hill; Louise Dyson; Michael J Tildesley; Matt J Keeling
Journal:  PLoS Comput Biol       Date:  2021-05-06       Impact factor: 4.475

5.  Assessing the effects of time-dependent restrictions and control actions to flatten the curve of COVID-19 in Kazakhstan.

Authors:  Ton Duc Do; Kok Yew Ng; Meei Mei Gui
Journal:  PeerJ       Date:  2021-02-03       Impact factor: 2.984

6.  Predictions of COVID-19 dynamics in the UK: Short-term forecasting and analysis of potential exit strategies.

Authors:  Matt J Keeling; Edward M Hill; Erin E Gorsich; Bridget Penman; Glen Guyver-Fletcher; Alex Holmes; Trystan Leng; Hector McKimm; Massimiliano Tamborrino; Louise Dyson; Michael J Tildesley
Journal:  PLoS Comput Biol       Date:  2021-01-22       Impact factor: 4.475

7.  Determining the level of social distancing necessary to avoid future COVID-19 epidemic waves: a modelling study for North East London.

Authors:  Nathan Cheetham; Jasmina Panovska-Griffiths; William Waites; Irene Ebyarimpa; Werner Leber; Katie Brennan
Journal:  Sci Rep       Date:  2021-03-11       Impact factor: 4.379

8.  The impact of school reopening on the spread of COVID-19 in England.

Authors:  Matt J Keeling; Michael J Tildesley; Benjamin D Atkins; Bridget Penman; Emma Southall; Glen Guyver-Fletcher; Alex Holmes; Hector McKimm; Erin E Gorsich; Edward M Hill; Louise Dyson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-05-31       Impact factor: 6.237

9.  Real-time nowcasting and forecasting of COVID-19 dynamics in England: the first wave.

Authors:  Paul Birrell; Joshua Blake; Edwin van Leeuwen; Nick Gent; Daniela De Angelis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-05-31       Impact factor: 6.237

10.  Individual variation in susceptibility or exposure to SARS-CoV-2 lowers the herd immunity threshold.

Authors:  M Gabriela M Gomes; Marcelo U Ferreira; Rodrigo M Corder; Jessica G King; Caetano Souto-Maior; Carlos Penha-Gonçalves; Guilherme Gonçalves; Maria Chikina; Wesley Pegden; Ricardo Aguas
Journal:  medRxiv       Date:  2022-02-14
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