Literature DB >> 33479376

Study of the active ingredients and mechanism of Sparganii rhizoma in gastric cancer based on HPLC-Q-TOF-MS/MS and network pharmacology.

Xiaona Lu1,2, Yawei Zheng2, Fang Wen2, Wenjie Huang2, Xiaoxue Chen2, Shuai Ruan2, Suping Gu2, Yue Hu1,2, Yuhao Teng1,2, Peng Shu3,4.   

Abstract

Sparganii rhizoma (SL) has potential therapeutic effects on gastric cancer (GC), but its main active ingredients and possible anticancer mechanism are still unclear. In this study, we used HPLC-Q-TOF-MS/MS to comprehensively analyse the chemical components of the aqueous extract of SL. On this basis, a network pharmacology method incorporating target prediction, gene function annotation, and molecular docking was performed to analyse the identified compounds, thereby determining the main active ingredients and hub genes of SL in the treatment of GC. Finally, the mRNA and protein expression levels of the hub genes of GC patients were further analysed by the Oncomine, GEPIA, and HPA databases. A total of 41 compounds were identified from the aqueous extract of SL. Through network analysis, we identified seven main active ingredients and ten hub genes: acacetin, sanleng acid, ferulic acid, methyl 3,6-dihydroxy-2-[(2-hydroxyphenyl) ethynyl]benzoate, caffeic acid, adenine nucleoside, azelaic acid and PIK3R1, PIK3CA, SRC, MAPK1, AKT1, HSP90AA1, HRAS, STAT3, FYN, and RHOA. The results indicated that SL might play a role in GC treatment by controlling the PI3K-Akt and other signalling pathways to regulate biological processes such as proliferation, apoptosis, migration, and angiogenesis in tumour cells. In conclusion, this study used HPLC-Q-TOF-MS/MS combined with a network pharmacology approach to provide an essential reference for identifying the chemical components of SL and its mechanism of action in the treatment of GC.

Entities:  

Year:  2021        PMID: 33479376      PMCID: PMC7820434          DOI: 10.1038/s41598-021-81485-0

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  56 in total

1.  ONCOMINE: a cancer microarray database and integrated data-mining platform.

Authors:  Daniel R Rhodes; Jianjun Yu; K Shanker; Nandan Deshpande; Radhika Varambally; Debashis Ghosh; Terrence Barrette; Akhilesh Pandey; Arul M Chinnaiyan
Journal:  Neoplasia       Date:  2004 Jan-Feb       Impact factor: 5.715

2.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

3.  The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses.

Authors:  Gil Stelzer; Naomi Rosen; Inbar Plaschkes; Shahar Zimmerman; Michal Twik; Simon Fishilevich; Tsippi Iny Stein; Ron Nudel; Iris Lieder; Yaron Mazor; Sergey Kaplan; Dvir Dahary; David Warshawsky; Yaron Guan-Golan; Asher Kohn; Noa Rappaport; Marilyn Safran; Doron Lancet
Journal:  Curr Protoc Bioinformatics       Date:  2016-06-20

4.  Impact of alkyl esters of caffeic and ferulic acids on tumor cell proliferation, cyclooxygenase enzyme, and lipid peroxidation.

Authors:  Bolleddula Jayaprakasam; Mulabagal Vanisree; Yanjun Zhang; David L Dewitt; Muraleedharan G Nair
Journal:  J Agric Food Chem       Date:  2006-07-26       Impact factor: 5.279

5.  A comparative tissue-specific metabolite analysis and determination of protodioscin content in Asparagus species used in traditional Chinese medicine and Ayurveda by use of laser microdissection, UHPLC-QTOF/MS and LC-MS/MS.

Authors:  Yogini Jaiswal; Zhitao Liang; Alan Ho; Hubiao Chen; Zhongzhen Zhao
Journal:  Phytochem Anal       Date:  2014-04-16       Impact factor: 3.373

Review 6.  Signal transducer and activator of transcription 3 as a therapeutic target for cancer and the tumor microenvironment.

Authors:  Byung-Hak Kim; Eun Hee Yi; Sang-Kyu Ye
Journal:  Arch Pharm Res       Date:  2016-08-11       Impact factor: 4.946

7.  High-resolution MS, MS/MS, and UV database of fungal secondary metabolites as a dereplication protocol for bioactive natural products.

Authors:  Tamam El-Elimat; Mario Figueroa; Brandie M Ehrmann; Nadja B Cech; Cedric J Pearce; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2013-08-16       Impact factor: 4.050

8.  Chemical Profiling of Lobelia chinensis with High-Performance Liquid Chromatography/Quadrupole Time-of-Flight Mass Spectrometry (HPLC/Q-TOF MS) Reveals Absence of Lobeline in the Herb.

Authors:  Haixing Wang; Yuanyuan Li; Yeqing Huang; Chunyan Zhao; Hon-Yeung Cheung
Journal:  Molecules       Date:  2018-12-10       Impact factor: 4.411

9.  A network pharmacology approach to determine active compounds and action mechanisms of ge-gen-qin-lian decoction for treatment of type 2 diabetes.

Authors:  Huiying Li; Linhua Zhao; Bo Zhang; Yuyu Jiang; Xu Wang; Yun Guo; Hongxing Liu; Shao Li; Xiaolin Tong
Journal:  Evid Based Complement Alternat Med       Date:  2014-01-16       Impact factor: 2.629

10.  MicroRNA-490-3p regulates cell proliferation and apoptosis in gastric cancer via direct targeting of AKT1.

Authors:  Hong Yu; Jianying Sun; Shaochang Jiang; Ying Xu
Journal:  Exp Ther Med       Date:  2018-12-03       Impact factor: 2.447

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  3 in total

1.  Endophytic Trichoderma strains isolated from forest species of the Cerrado-Caatinga ecotone are potential biocontrol agents against crop pathogenic fungi.

Authors:  Estefenson Marques Morais; Alex Ap Rosini Silva; Francisco Wderson Araújo de Sousa; Izabelle Maria Barboza de Azevedo; Helane França Silva; Alice Maria Gonçalves Santos; José Evando Aguiar Beserra Júnior; Caroline Pais de Carvalho; Marcos Nogueira Eberlin; Andreia M Porcari; Francisca Diana da Silva Araújo
Journal:  PLoS One       Date:  2022-04-15       Impact factor: 3.752

2.  Characterization of serum protein expression profiles in the early sarcopenia older adults with low grip strength: a cross-sectional study.

Authors:  Jingqiong Wu; Longjun Cao; Jiazhi Wang; Yizhao Wang; Huimin Hao; Liping Huang
Journal:  BMC Musculoskelet Disord       Date:  2022-10-03       Impact factor: 2.562

3.  Mitigation of Gastric Damage Using Cinnamomum cassia Extract: Network Pharmacological Analysis of Active Compounds and Protection Effects in Rats.

Authors:  Ji Hwan Lee; Hee Jae Kwak; Dongchul Shin; Hye Jin Seo; Shin Jung Park; Bo-Hee Hong; Myoung-Sook Shin; Seung Hyun Kim; Ki Sung Kang
Journal:  Plants (Basel)       Date:  2022-03-08
  3 in total

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