| Literature DB >> 33474607 |
Nora Franziska Dengler1, Vince Istvan Madai2,3, Meike Unteroberdörster4, Esra Zihni2,5, Sophie Charlotte Brune4, Adam Hilbert2, Michelle Livne2, Stefan Wolf4, Peter Vajkoczy4, Dietmar Frey4,2.
Abstract
Reliable prediction of outcomes of aneurysmal subarachnoid hemorrhage (aSAH) based on factors available at patient admission may support responsible allocation of resources as well as treatment decisions. Radiographic and clinical scoring systems may help clinicians estimate disease severity, but their predictive value is limited, especially in devising treatment strategies. In this study, we aimed to examine whether a machine learning (ML) approach using variables available on admission may improve outcome prediction in aSAH compared to established scoring systems. Combined clinical and radiographic features as well as standard scores (Hunt & Hess, WFNS, BNI, Fisher, and VASOGRADE) available on patient admission were analyzed using a consecutive single-center database of patients that presented with aSAH (n = 388). Different ML models (seven algorithms including three types of traditional generalized linear models, as well as a tree bosting algorithm, a support vector machine classifier (SVMC), a Naive Bayes (NB) classifier, and a multilayer perceptron (MLP) artificial neural net) were trained for single features, scores, and combined features with a random split into training and test sets (4:1 ratio), ten-fold cross-validation, and 50 shuffles. For combined features, feature importance was calculated. There was no difference in performance between traditional and other ML applications using traditional clinico-radiographic features. Also, no relevant difference was identified between a combined set of clinico-radiological features available on admission (highest AUC 0.78, tree boosting) and the best performing clinical score GCS (highest AUC 0.76, tree boosting). GCS and age were the most important variables for the feature combination. In this cohort of patients with aSAH, the performance of functional outcome prediction by machine learning techniques was comparable to traditional methods and established clinical scores. Future work is necessary to examine input variables other than traditional clinico-radiographic features and to evaluate whether a higher performance for outcome prediction in aSAH can be achieved.Entities:
Keywords: Aneurysmal subarachnoid hemorrhage; Artificial neural net; Deep learning; Outcome prediction; Tree boosting
Mesh:
Year: 2021 PMID: 33474607 PMCID: PMC8490233 DOI: 10.1007/s10143-020-01453-6
Source DB: PubMed Journal: Neurosurg Rev ISSN: 0344-5607 Impact factor: 3.042
Overview of the 8 different feature selections. ICH = intracranial hemorrhage; IVH = intraventricular hemorrhage; SDH = subdural hemorrhage; GCS = Glasgow Coma Scale score; BNI = Barrow Neurological Institute scale; WFNS = World Federation of Neurosurgical Societies
| Feature(s) | |
|---|---|
| 1 | Hunt and Hess Score value |
| 2 | WFNS score value |
| 3 | Original Fisher score value |
| 4 | Modified Fisher score value |
| 5 | VASOGRADE score value |
| 6 | BNI score value |
| 7 | Glasgow Coma Scale value |
| 8 | Age, GCS score, sex, pupil status, presence of IVH, presence of ICH, presence of midline shift > 5 mm, presence of SDH, localization anterior circulation or other, BNI score |
Clinical, radiographic, and treatment characteristics of patients with aSAH. Pathological pupil reaction describes a pupil reaction other than pupils equal and reactive to light. WFNS World Federation of Neurological Societies, IVH intraventricular hemorrhage, ICH intracerebral hemorrhage, SDH subdural hemorrhage, SAH subarachnoidal hemorrhage, ACA anterior cerebral artery, MCA middle cerebral artery, ICA internal cerebral artery, mRS Modified Rankin Scale. Localization of the aneurysm was available for 380/388 patients
| % ( | |||
|---|---|---|---|
| Clinical features | Pathological pupil reaction | 13.4% (52) | |
| GCS at admission | 3 | 32.3% (125) | |
| 4–8 | 8.7% (34) | ||
| 9–12 | 9.0% (35) | ||
| 13–15 | 50.0% (194) | ||
| Clinical scores | WFNS | I | 36.6% (142) |
| II | 9.8% (38) | ||
| III | 3.4% (13) | ||
| IV | 12.6% (49) | ||
| V | 37.6% (146) | ||
| Hunt and Hess | I | 24.2% (94) | |
| II | 17.5% (68) | ||
| III | 14.7% (57) | ||
| IV | 14.2% (55) | ||
| V | 29.4% (114) | ||
| Radiographic features | IVH | 44.3% (172) | |
| ICH | 32.0% (124) | ||
| SDH | 6.5% (25) | ||
| Midline shift (> = 5 mm) | 23.1% (89) | ||
| Thickness of SAH (BNI) | < 5 mm (1°) | 6.4% (25) | |
| 6–10 mm (2°) | 16.0% (62) | ||
| 11–15 mm (3°) | 29.9% (116) | ||
| 15–20 mm (4°) | 32.0% (124) | ||
| > 25 mm (5°) | 15.7% (61) | ||
| Aneurysm location | ACA | 35.8% (136) | |
| ICA | 19.2% (73) | ||
| MCA | 26.1% (99) | ||
| Posterior circulation | 18.9% (72) | ||
| Radiographic scores | Modified Fisher | 0 | 4.6% (18) |
| 1 | 12.1% (47) | ||
| 2 | 5.9% (23) | ||
| 3 | 26.8% (104) | ||
| 4 | 50.5% (196) | ||
| Combined score | VASOGRADE | Green | 15.9% (62) |
| Yellow | 34.1% (132) | ||
| Red | 50.0% (194) | ||
| Outcome | Favorable | mRS 0 | 22.2% (86) |
| mRS 1 | 18.3% (71) | ||
| mRS 2 | 6.2% (24) | ||
| mRS 3 | 7.2% (28) | ||
| Unfavorable | mRS 4 | 7.7% (30) | |
| mRS 5 | 4.9% (19) | ||
| mRS 6 | 33.5% (130) | ||
| Treatment | Coiling | 57.9% (220) | |
| Clipping | 27.9% (106) | ||
| Other | 2.6% (10) | ||
| None | 10.9% (25) |
Predictive performance of clinical, radiological, and combined scores as well as the combined feature set (see “Materials and methods” section) for unfavorable patient outcome (mRS 3–6) measured by AUC. Median AUC for the training and the test set (in bold) as well as the interquartile range (IQR) for the test set (in brackets) over 50 shuffles are shown. AUC area under the curve, BNI Barrow Neurological Institute scale, GCS Glasgow Coma Scale, GLM generalized linear model, ICH intracerebral hemorrhage, IVH intraventricular hemorrhage, MLP multilayer perceptron, mRS Modified Rankin Scale, NB Naive Bayes, WFNS World Federation of Neurological Societies, SAH subarachnoidal hemorrhage, SDH subdural hemorrhage, SVMC support vector machine classifier
| Features | GLM | GLM_Lasso | GLM_elastic_net | CatBoost | MLP | SVMC | NB |
|---|---|---|---|---|---|---|---|
| Hunt and Hess score | 0.75/0.76 (0.07) | 0.75/0.75 (0.08) | 0.75/0.0.75 (0.08) | 0.75/0.76 (0.07) | 0.75/0.76 (0.07) | 0.75/0.75 (0.07) | 0.75/0.76 (0.07) |
| WFNS score | 0.74/0.74 (0.04) | 0.74/0.74 (0.04) | 0.73/0.74 (0.09) | 0.74/0.74 (0.04) | 0.74/0.74 (0.04) | 0.74/0.74 (0.05) | 0.74/0.74 (0.04) |
| Modified Fisher score | 0.65/0.65 (0.07) | 0.65/0.65 (0.07) | 0.64/0.62 (0.15) | 0.65/0.65 (0.07) | 0.64/0.65 (0.07) | 0.65/0.64 (0.07) | 0.65/0.65 (0.07) |
| Original Fisher score | 0.55/0.55 (0.04) | 0.55/0.55 (0.05) | 0.55/0.52 (0.11) | 0.55/0.55 (0.06) | 0.55/0.55 (0.04) | 0.49/0.47 (0.11) | 0.55/0.54 (0.08) |
| VASOGRADE score | 0.72/0.72 (0.07) | 0.72/0.72 (0.07) | 0.72/0.72 (0.09) | 0.72/0.71 (0.06) | 0.72/0.72 (0.06) | 0.72/0.72 (0.07) | 0.72/0.72 (0.07) |
| BNI score | 0.62/0.0.63 (0.06) | 0.62/0.63 (0.06) | 0.61/0.60 (0.15) | 0.62/0.62 (0.07) | 0.62/0.62 (0.07) | 0.62/0.62 (0.08) | 0.62/0.63 (0.06) |
| GCS score | 0.75/0.76 (0.05) | 0.75/0.76 (0.05) | 0.75/0.75 (0.07) | 0.76/0.76 (0.06) | 0.75/0.76 (0.06) | 0.75/0.76 (0.05) | 0.75/0.76 (0.05) |
| Age, GCS score, sex, pupil status, presence of IVH, presence of ICH, presence of midline shift > 5 mm, presence of SDH, localization anterior circulation or other, BNI score | 0.79/0.77 (0.06) | 0.78/0.77 (0.06) | 0.77/0.77 (0.07) | 0.82/0.78 (0.07) | 0.78/0.77 (0.06) | 0.78/0.77 (0.06) | 0.76/0.75 (0.07) |
Fig. 1Graphical representation of the performance and feature rating for the clinico-radiological model. A The highest test-AUC was 0.78 for the tree boosting model, with the exception of NB (0.75); the other models had a test-AUC value of 0.77. A larger difference between training and test set was observed for the tree boosting model indicative of overfitting. B The feature importance rankings consistently identified GCS as the most important factor. Note that model 7, GCS alone, already reached a test-AUC of 0.76. AUC area under the curve, GCS Glasgow Coma Scale, GLM generalized linear model, IVH presence of intraventricular hemorrhage, ICH presence of intracranial hemorrhage, NB Naive Bayes, MLP multilayer perceptron, SDH presence of subdural hematoma, SVMC support vector machine classifier, BNI semi-quantitative analysis of the thickness of subarachnoidal blood with respect to the scale introduced by the Barrow Neurological Institute in 2012[7]. The term “localization” refers to the localization of the aneurysm (anterior circulation yes/no)
Brier score results for clinical, radiological, and combined scores as well as the combined feature set (see “Materials and methods” section) for prediction of unfavorable patient outcome (mRS 3–6). Median Brier score for the training and the test set (in bold) as well as the interquartile range (IQR) for the test set (in brackets) over 50 shuffles are shown. AUC area under the curve, BNI Barrow Neurological Institute scale, GCS Glasgow Coma Scale, GLM generalized linear model, ICH intracerebral hemorrhage, IVH intraventricular hemorrhage, MLP multilayer perceptron, mRS Modified Rankin Scale, NB Naive Bayes, WFNS World Federation of Neurological Surgeons, SAH subarachnoidal hemorrhage, SDH subdural hemorrhage, SVMC support vector machine classifier
| Features | GLM | GLM_Lasso | GLM_elastic_net | CatBoost | MLP | SVMC | NB |
|---|---|---|---|---|---|---|---|
| Hunt and Hess score | 0.20/0.20 (0.02) | 0.20/0.20 (0.02) | 0.24/0.0.24 (0.06) | 0.20/0.20 (0.02) | 0.21/0.23 (0.05) | 0.20/0.20 (0.02) | 0.20/0.20 (0.03) |
| WFNS score | 0.20/0.20 (0.02) | 0.20/0.20 (0.01) | 0.23/0.22 (0.06) | 0.20/0.20 (0.02) | 0.23/0.24 (0.05) | 0.20/0.20 (0.02) | 0.20/0.20 (0.02) |
| Modified Fisher score | 0.23/0.23 (0.02) | 0.24/0.24 (0.01) | 0.25/0.25 (0.03) | 0.23/0.23 (0.02) | 0.24/0.25 (0.02) | 0.23/0.23 (0.01) | 0.24/0.24 (0.02) |
| Original Fisher score | 0.25/0.25 (0.01) | 0.25/0.25 (0.00) | 0.28/0.27 (0.06) | 0.25/0.25 (0.01) | 0.25/0.25 (0.00) | 0.25/0.25 (0.00) | 0.25/0.25 (0.02) |
| VASOGRADE score | 0.21/0.21 (0.02) | 0.21/0.21 (0.02) | 0.24/0.24 (0.07) | 0.20/0.20 (0.03) | 0.20/0.20 (0.03) | 0.20/0.21 (0.03) | 0.21/0.21 (0.03) |
| BNI score | 0.24/0.0.24 (0.01) | 0.24/0.24 (0.01) | 0.25/0.25 (0.04) | 0.24/0.24 (0.01) | 0.25/0.25 (0.01) | 0.24/0.24 (0.01) | 0.24/0.24 (0.01) |
| GCS score | 0.20/0.20 (0.02) | 0.20/0.20 (0.02) | 0.24/0.23 (0.05) | 0.19/0.19 (0.03) | 0.21/0.23 (0.05) | 0.20/0.20 (0.02) | 0.20/0.20 (0.03) |
| Age, GCS score, sex, pupil status, presence of IVH, presence of ICH, presence of midline shift > 5 mm, presence of SDH, localization anterior circulation or other, BNI score | 0.19/0.19 (0.03) | 0.19/0.19 (0.03) | 0.20/0.21 (0.03) | 0.18/0.19 (0.03) | 0.19/0.20 (0.04) | 0.19/0.19 (0.03) | 0.24/0.23 (0.07) |