Literature DB >> 33474176

The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae).

Yong-In Kim1, Jung-Hoon Lee2, Young-Dong Kim2.   

Abstract

Chrysosplenium aureobracteatum is endemic to Korea. This species is primarily found in Gyeonggi Province and Gangwon Province in the central part of the Korean Peninsula. The complete chloroplast genome (cpDNA) sequence of C. aureobracteatum was characterized using Illumina paired-end sequencing. The cpDNA is 153,102 bp in length and contains a pair of 26,017-bp inverted repeats (IRs), a large single copy (LSC) region of 83,752 bp, and a small single copy (SSC) region of 17,316 bp. It contains 131 genes, including 84 protein-coding genes (78 PCG species), eight ribosomal RNA genes (four RNA species), 37 transfer RNA genes (30 tRNA species), and one pseudogene (accD). The overall G + C content of the whole genome is 37.3%. Phylogenetic analysis based on 24 chloroplast genomes indicates that C. aureobracteatum is closely related to Bergenia scopulosa.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chrysosplenium; Saxifragaceae; chloroplast genome; endemic species

Year:  2018        PMID: 33474176      PMCID: PMC7800530          DOI: 10.1080/23802359.2018.1450668

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  Complete chloroplast genome sequence of Chrysosplenium macrophyllum and Chrysosplenium flagelliferum (Saxifragaceae).

Authors:  Wen-Jie Yan; Tian-Ge Yang; Rui Liao; Zhi-Hua Wu; Rui Qin; Hong Liu
Journal:  Mitochondrial DNA B Resour       Date:  2020-05-12       Impact factor: 0.658

  1 in total

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