Literature DB >> 33457734

Complete chloroplast genome sequence of Chrysosplenium macrophyllum and Chrysosplenium flagelliferum (Saxifragaceae).

Wen-Jie Yan1, Tian-Ge Yang2, Rui Liao2, Zhi-Hua Wu2, Rui Qin2, Hong Liu2.   

Abstract

The complete chloroplast genome of Chrysosplenium macrophyllum Oliv. and Chrysosplenium flagelliferum Fr. Schmidt. were reported in this study. The chloroplast genomes were 152,837 bp for C. macrophyllum and 151,679 bp for C. flagelliferum. LSC and SSC of 83,584 bp and 17,265 bp were separated by two IRs of 25,994 bp each in C. macrophyllum. While C. flagelliferum contained IRs of 25,973 bp, LSC of 82,772 bp and SSC of 16,961 bp, for a total 151,679 bp length. The chloroplast genome of Chrysosplenium macrophyllum contains 130 genes, including 85 protein-coding genes (78 PCG species), 8 ribosomal RNA genes (4 rRNA species), 37 transfer RNA genes (30 tRNA species). And the chloroplast genome of Chrysosplenium flagelliferum contains 130 genes, including 85 protein-coding genes (78 PCG species), 8 ribosomal RNA genes (4 rRNA species), 37 transfer RNA genes (30 tRNA species).
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloroplastgenome; Chrysosplenium

Year:  2020        PMID: 33457734      PMCID: PMC7782184          DOI: 10.1080/23802359.2020.1760152

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  5 in total

1.  Phylogenetic relationships and evolution in Chrysosplenium (Saxifragaceae) based on matK sequence data.

Authors:  D E Soltis; M Tago-Nakazawa; Q Y Xiang; S Kawano; J Murata; M Wakabayashi; C Hibsch-Jetter
Journal:  Am J Bot       Date:  2001-05       Impact factor: 3.844

2.  An improved chloroplast DNA extraction procedure for whole plastid genome sequencing.

Authors:  Chao Shi; Na Hu; Hui Huang; Ju Gao; You-Jie Zhao; Li-Zhi Gao
Journal:  PLoS One       Date:  2012-02-22       Impact factor: 3.240

3.  Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.

Authors:  Sergey Koren; Brian P Walenz; Konstantin Berlin; Jason R Miller; Nicholas H Bergman; Adam M Phillippy
Journal:  Genome Res       Date:  2017-03-15       Impact factor: 9.043

4.  Complete chloroplast genome sequence of Chrysosplenium sinicum and Chrysosplenium lanuginosum (Saxifragaceae).

Authors:  Rui Liao; Xiang Dong; Zhi-Hua Wu; Rui Qin; Hong Liu
Journal:  Mitochondrial DNA B Resour       Date:  2019-07-10       Impact factor: 0.658

5.  The complete chloroplast genome of a Korean endemic plant Chrysosplenium aureobracteatum Y.I. Kim & Y.D. Kim (Saxifragaceae).

Authors:  Yong-In Kim; Jung-Hoon Lee; Young-Dong Kim
Journal:  Mitochondrial DNA B Resour       Date:  2018-03-16       Impact factor: 0.658

  5 in total

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