| Literature DB >> 33473612 |
Sudip K Mohanta1, Subrat K Swain2, Sofia P Das2, Amrita Bit2, Gargee Das2, Sanghamitra Pradhan2, Jitendra K Sundaray2, P Jayasankar2, A S Ninawe3, Paramananda Das2.
Abstract
The complete mitochondrial genome of Etroplus suratensis, the Green chromide cichlid, was determined for the first time through NGS method. The genome is 16,467 bp (Accession no. KU301747) in length and consisted of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. Organization of genes and their order are in accordance with other vertebrates. The overall base composition on plus strand was A: 28.3%, G: 15.2%, C: 30.9%, T: 25.6%, and the A + T content 53.9%. The control region contains a putative termination-associated sequence and three conserved sequence blocks. This mitogenome sequence data would play an important role in population genetics and phylogenetics of cichlid fish of India.Entities:
Keywords: Etroplus suratensis; NGS method; cichlidae; mitogenome; sequence
Year: 2016 PMID: 33473612 PMCID: PMC7800130 DOI: 10.1080/23802359.2016.1176877
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN: 2380-2359 Impact factor: 0.658