Literature DB >> 33464960

Omics: The way forward to enhance abiotic stress tolerance in Brassica napus L.

Ali Raza1, Ali Razzaq2, Sundas Saher Mehmood1, Muhammad Azhar Hussain1, Su Wei1, Huang He1, Qamar U Zaman1, Zhang Xuekun3, Mirza Hasanuzzaman4.   

Abstract

Plant abiotic stresses negative affects growth and development, causing a massive reduction in global agricultural production. Rapeseed (Brassica napus L.) is a major oilseed crop because of its economic value and oilseed production. However, its productivity has been reduced by many environmental adversities. Therefore, it is a prime need to grow rapeseed cultivars, which can withstand numerous abiotic stresses. To understand the various molecular and cellular mechanisms underlying the abiotic stress tolerance and improvement in rapeseed, omics approaches have been extensively employed in recent years. This review summarized the recent advancement in genomics, transcriptomics, proteomics, metabolomics, and their imploration in abiotic stress regulation in rapeseed. Some persisting bottlenecks have been highlighted, demanding proper attention to fully explore the omics tools. Further, the potential prospects of the CRISPR/Cas9 system for genome editing to assist molecular breeding in developing abiotic stress-tolerant rapeseed genotypes have also been explained. In short, the combination of integrated omics, genome editing, and speed breeding can alter rapeseed production worldwide.

Entities:  

Keywords:  CRISPR/Cas9; climate-resilient rapeseed; drought; marker-assisted selection; metabolomics; salinity; systems biology; transcriptomics

Mesh:

Year:  2021        PMID: 33464960      PMCID: PMC7833762          DOI: 10.1080/21645698.2020.1859898

Source DB:  PubMed          Journal:  GM Crops Food        ISSN: 2164-5698            Impact factor:   3.074


  106 in total

1.  Genome-wide identification, functional prediction, and evolutionary analysis of the R2R3-MYB superfamily in Brassica napus.

Authors:  Ali Hajiebrahimi; Hajar Owji; Shiva Hemmati
Journal:  Genome       Date:  2017-07-21       Impact factor: 2.166

2.  Proteomic and biochemical responses of canola (Brassica napus L.) exposed to salinity stress and exogenous lipoic acid.

Authors:  Mustafa Yıldız; Nermin Akçalı; Hakan Terzi
Journal:  J Plant Physiol       Date:  2015-03-20       Impact factor: 3.549

3.  Study on salt tolerance with YHem1 transgenic canola (Brassica napus).

Authors:  Xin-E Sun; Xin-Xin Feng; Cui Li; Zhi-Ping Zhang; Liang-Ju Wang
Journal:  Physiol Plant       Date:  2014-10-29       Impact factor: 4.500

4.  Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome.

Authors:  Boulos Chalhoub; France Denoeud; Shengyi Liu; Isobel A P Parkin; Haibao Tang; Xiyin Wang; Julien Chiquet; Harry Belcram; Chaobo Tong; Birgit Samans; Margot Corréa; Corinne Da Silva; Jérémy Just; Cyril Falentin; Chu Shin Koh; Isabelle Le Clainche; Maria Bernard; Pascal Bento; Benjamin Noel; Karine Labadie; Adriana Alberti; Mathieu Charles; Dominique Arnaud; Hui Guo; Christian Daviaud; Salman Alamery; Kamel Jabbari; Meixia Zhao; Patrick P Edger; Houda Chelaifa; David Tack; Gilles Lassalle; Imen Mestiri; Nicolas Schnel; Marie-Christine Le Paslier; Guangyi Fan; Victor Renault; Philippe E Bayer; Agnieszka A Golicz; Sahana Manoli; Tae-Ho Lee; Vinh Ha Dinh Thi; Smahane Chalabi; Qiong Hu; Chuchuan Fan; Reece Tollenaere; Yunhai Lu; Christophe Battail; Jinxiong Shen; Christine H D Sidebottom; Xinfa Wang; Aurélie Canaguier; Aurélie Chauveau; Aurélie Bérard; Gwenaëlle Deniot; Mei Guan; Zhongsong Liu; Fengming Sun; Yong Pyo Lim; Eric Lyons; Christopher D Town; Ian Bancroft; Xiaowu Wang; Jinling Meng; Jianxin Ma; J Chris Pires; Graham J King; Dominique Brunel; Régine Delourme; Michel Renard; Jean-Marc Aury; Keith L Adams; Jacqueline Batley; Rod J Snowdon; Jorg Tost; David Edwards; Yongming Zhou; Wei Hua; Andrew G Sharpe; Andrew H Paterson; Chunyun Guan; Patrick Wincker
Journal:  Science       Date:  2014-08-21       Impact factor: 47.728

5.  High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L.

Authors:  Régine Delourme; Cyril Falentin; Berline Fopa Fomeju; Marie Boillot; Gilles Lassalle; Isabelle André; Jorge Duarte; Valérie Gauthier; Nicole Lucante; Amandine Marty; Maryline Pauchon; Jean-Philippe Pichon; Nicolas Ribière; Gwenn Trotoux; Philippe Blanchard; Nathalie Rivière; Jean-Pierre Martinant; Jérôme Pauquet
Journal:  BMC Genomics       Date:  2013-02-22       Impact factor: 3.969

6.  ocsESTdb: a database of oil crop seed EST sequences for comparative analysis and investigation of a global metabolic network and oil accumulation metabolism.

Authors:  Tao Ke; Jingyin Yu; Caihua Dong; Han Mao; Wei Hua; Shengyi Liu
Journal:  BMC Plant Biol       Date:  2015-01-21       Impact factor: 4.215

7.  Genome-Wide Identification and Expression Analysis of WRKY Transcription Factors under Multiple Stresses in Brassica napus.

Authors:  Yajun He; Shaoshuai Mao; Yulong Gao; Liying Zhu; Daoming Wu; Yixin Cui; Jiana Li; Wei Qian
Journal:  PLoS One       Date:  2016-06-20       Impact factor: 3.240

8.  Histological, hormonal and transcriptomic reveal the changes upon gibberellin-induced parthenocarpy in pear fruit.

Authors:  Lulu Liu; Zhigang Wang; Jianlong Liu; Fengxia Liu; Rui Zhai; Chunqin Zhu; Huibin Wang; Fengwang Ma; Lingfei Xu
Journal:  Hortic Res       Date:  2018-01-03       Impact factor: 6.793

9.  Genome-Wide Association Study Reveals the Genetic Architecture Underlying Salt Tolerance-Related Traits in Rapeseed (Brassica napus L.).

Authors:  Heping Wan; Lunlin Chen; Jianbin Guo; Qun Li; Jing Wen; Bin Yi; Chaozhi Ma; Jinxing Tu; Tingdong Fu; Jinxiong Shen
Journal:  Front Plant Sci       Date:  2017-04-26       Impact factor: 5.753

10.  Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness.

Authors:  Michiru Nishita; Seung-Yeol Park; Tadashi Nishio; Koki Kamizaki; ZhiChao Wang; Kota Tamada; Toru Takumi; Ryuju Hashimoto; Hiroki Otani; Gregory J Pazour; Victor W Hsu; Yasuhiro Minami
Journal:  Sci Rep       Date:  2017-01-26       Impact factor: 4.379

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  12 in total

Review 1.  Omics-Facilitated Crop Improvement for Climate Resilience and Superior Nutritive Value.

Authors:  Tinashe Zenda; Songtao Liu; Anyi Dong; Jiao Li; Yafei Wang; Xinyue Liu; Nan Wang; Huijun Duan
Journal:  Front Plant Sci       Date:  2021-12-01       Impact factor: 5.753

2.  De novo Transcriptome Analysis of Drought-Adapted Cluster Bean (Cultivar RGC-1025) Reveals the Wax Regulatory Genes Involved in Drought Resistance.

Authors:  B Manohara Reddy; A M Anthony Johnson; N Jagadeesh Kumar; Boya Venkatesh; N Jayamma; Merum Pandurangaiah; Chinta Sudhakar
Journal:  Front Plant Sci       Date:  2022-06-28       Impact factor: 6.627

Review 3.  Understanding the Phytoremediation Mechanisms of Potentially Toxic Elements: A Proteomic Overview of Recent Advances.

Authors:  Mohammed Alsafran; Kamal Usman; Bilal Ahmed; Muhammad Rizwan; Muhammad Hamzah Saleem; Hareb Al Jabri
Journal:  Front Plant Sci       Date:  2022-05-06       Impact factor: 6.627

Review 4.  Ionomic Approaches for Discovery of Novel Stress-Resilient Genes in Plants.

Authors:  Sajad Ali; Anshika Tyagi; Hanhong Bae
Journal:  Int J Mol Sci       Date:  2021-07-02       Impact factor: 5.923

Review 5.  Two Decades of Desiccation Biology: A Systematic Review of the Best Studied Angiosperm Resurrection Plants.

Authors:  Shandry M Tebele; Rose A Marks; Jill M Farrant
Journal:  Plants (Basel)       Date:  2021-12-16

6.  Mechanistic Insights Into Trehalose-Mediated Cold Stress Tolerance in Rapeseed (Brassica napus L.) Seedlings.

Authors:  Ali Raza; Wei Su; Ziqi Jia; Dan Luo; Yi Zhang; Ang Gao; Muhammad Azhar Hussain; Sundas Saher Mehmood; Yong Cheng; Yan Lv; Xiling Zou
Journal:  Front Plant Sci       Date:  2022-03-10       Impact factor: 5.753

Review 7.  Genetic and Physiological Responses to Heat Stress in Brassica napus.

Authors:  Mariam Kourani; Fady Mohareb; Faisal I Rezwan; Maria Anastasiadi; John P Hammond
Journal:  Front Plant Sci       Date:  2022-04-05       Impact factor: 6.627

8.  Genome-Wide Identification of Brassicaceae Hormone-Related Transcription Factors and Their Roles in Stress Adaptation and Plant Height Regulation in Allotetraploid Rapeseed.

Authors:  Shengjie Ma; Liwei Zheng; Xiaohan Liu; Kaiyan Zhang; Linlin Hu; Yingpeng Hua; Jinyong Huang
Journal:  Int J Mol Sci       Date:  2022-08-06       Impact factor: 6.208

9.  Genome-wide identification and functional analysis of cupin_1 domain-containing members involved in the responses to Sclerotinia sclerotiorum and abiotic stress in Brassica napus.

Authors:  Yizhou He; Yan Li; Zetao Bai; Meili Xie; Rong Zuo; Jie Liu; Jing Xia; Xiaohui Cheng; Yueying Liu; Chaobo Tong; Yuanyuan Zhang; Shengyi Liu
Journal:  Front Plant Sci       Date:  2022-08-01       Impact factor: 6.627

Review 10.  Advances in "Omics" Approaches for Improving Toxic Metals/Metalloids Tolerance in Plants.

Authors:  Ali Raza; Javaria Tabassum; Zainab Zahid; Sidra Charagh; Shanza Bashir; Rutwik Barmukh; Rao Sohail Ahmad Khan; Fernando Barbosa; Chong Zhang; Hua Chen; Weijian Zhuang; Rajeev K Varshney
Journal:  Front Plant Sci       Date:  2022-01-04       Impact factor: 5.753

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