Literature DB >> 33462309

Evaluation of aromatic amino acids as potential biomarkers in breast cancer by Raman spectroscopy analysis.

Shaymus Contorno1, Richard E Darienzo1, Rina Tannenbaum2,3.   

Abstract

The scope of the work undertaken in this paper was to explore the feasibility and reliability of using the Raman signature of aromatic amino acids as a marker in the detection of the presence of breast cancer and perhaps, even the prediction of cancer development in very early stages of cancer onset. To be able to assess this hypothesis, we collected most recent and relevant literature in which Raman spectroscopy was used as an analytical tool in the evaluation of breast cell lines and breast tissue, re-analyzed all the Raman spectra, and extracted all spectral bands from each spectrum that were indicative of aromatic amino acids. The criteria for the consideration of the various papers for this study, and hence, the inclusion of the data that they contained were two-fold: (1) The papers had to focus on the characterization of breast tissue with Raman spectroscopy, and (2) the spectra provided within these papers included the spectral range of 500-1200 cm-1, which constitutes the characteristic region for aromatic amino acid vibrational modes. After all the papers that satisfied these criteria were collected, the relevant spectra from each paper were extracted, processed, normalized. All data were then plotted without bias in order to decide whether there is a pattern that can shed light on a possible diagnostic classification. Remarkably, we have been able to demonstrate that cancerous breast tissues and cells decidedly exhibit overexpression of aromatic amino acids and that the difference between the extent of their presence in cancerous cells and healthy cells is overwhelming. On the basis of this analysis, we conclude that it is possible to use the signature Raman bands of aromatic amino acids as a biomarker for the detection, evaluation and diagnosis of breast cancer.

Entities:  

Year:  2021        PMID: 33462309     DOI: 10.1038/s41598-021-81296-3

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  40 in total

1.  Comparison of various types of hydrogen bonds involving aromatic amino acids.

Authors:  Steve Scheiner; Tapas Kar; Jayasree Pattanayak
Journal:  J Am Chem Soc       Date:  2002-11-06       Impact factor: 15.419

2.  Membrane interfacial localization of aromatic amino acids and membrane protein function.

Authors:  Devaki A Kelkar; Amitabha Chattopadhyay
Journal:  J Biosci       Date:  2006-09       Impact factor: 1.826

3.  Electronic structure of aromatic amino acids studied by soft x-ray spectroscopy.

Authors:  Wenhua Zhang; Vincenzo Carravetta; Oksana Plekan; Vitaliy Feyer; Robert Richter; Marcello Coreno; Kevin C Prince
Journal:  J Chem Phys       Date:  2009-07-21       Impact factor: 3.488

4.  pi-Stacking interactions. Alive and well in proteins.

Authors:  G B McGaughey; M Gagné; A K Rappé
Journal:  J Biol Chem       Date:  1998-06-19       Impact factor: 5.157

5.  Aromatic residues link binding and function of intrinsically disordered proteins.

Authors:  L Michel Espinoza-Fonseca
Journal:  Mol Biosyst       Date:  2011-08-24

6.  Amino-aromatic interactions in proteins.

Authors:  S K Burley; G A Petsko
Journal:  FEBS Lett       Date:  1986-07-28       Impact factor: 4.124

7.  Geometry of interplanar residue contacts in protein structures.

Authors:  L Brocchieri; S Karlin
Journal:  Proc Natl Acad Sci U S A       Date:  1994-09-27       Impact factor: 11.205

8.  Stacking and T-shape competition in aromatic-aromatic amino acid interactions.

Authors:  Riccardo Chelli; Francesco Luigi Gervasio; Piero Procacci; Vincenzo Schettino
Journal:  J Am Chem Soc       Date:  2002-05-29       Impact factor: 15.419

9.  The cation-π interaction.

Authors:  Dennis A Dougherty
Journal:  Acc Chem Res       Date:  2012-12-07       Impact factor: 22.384

10.  Cation-pi interactions involving aromatic amino acids.

Authors:  Dennis A Dougherty
Journal:  J Nutr       Date:  2007-06       Impact factor: 4.798

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  1 in total

Review 1.  Unveiling Cancer Metabolism through Spontaneous and Coherent Raman Spectroscopy and Stable Isotope Probing.

Authors:  Jiabao Xu; Tong Yu; Christos E Zois; Ji-Xin Cheng; Yuguo Tang; Adrian L Harris; Wei E Huang
Journal:  Cancers (Basel)       Date:  2021-04-05       Impact factor: 6.639

  1 in total

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