Literature DB >> 23214924

The cation-π interaction.

Dennis A Dougherty1.   

Abstract

The chemistry community now recognizes the cation-π interaction as a major force for molecular recognition, joining the hydrophobic effect, the hydrogen bond, and the ion pair in determining macromolecular structure and drug-receptor interactions. This Account provides the author's perspective on the intellectual origins and fundamental nature of the cation-π interaction. Early studies on cyclophanes established that water-soluble, cationic molecules would forego aqueous solvation to enter a hydrophobic cavity if that cavity was lined with π systems. Important gas phase studies established the fundamental nature of the cation-π interaction. The strength of the cation-π interaction (Li(+) binds to benzene with 38 kcal/mol of binding energy; NH4(+) with 19 kcal/mol) distinguishes it from the weaker polar-π interactions observed in the benzene dimer or water-benzene complexes. In addition to the substantial intrinsic strength of the cation-π interaction in gas phase studies, the cation-π interaction remains energetically significant in aqueous media and under biological conditions. Many studies have shown that cation-π interactions can enhance binding energies by 2-5 kcal/mol, making them competitive with hydrogen bonds and ion pairs in drug-receptor and protein-protein interactions. As with other noncovalent interactions involving aromatic systems, the cation-π interaction includes a substantial electrostatic component. The six (four) C(δ-)-H(δ+) bond dipoles of a molecule like benzene (ethylene) combine to produce a region of negative electrostatic potential on the face of the π system. Simple electrostatics facilitate a natural attraction of cations to the surface. The trend for (gas phase) binding energies is Li(+) > Na(+) > K(+) > Rb(+): as the ion gets larger the charge is dispersed over a larger sphere and binding interactions weaken, a classical electrostatic effect. On other hand, polarizability does not define these interactions. Cyclohexane is more polarizable than benzene but a decidedly poorer cation binder. Many studies have documented cation-π interactions in protein structures, where lysine or arginine side chains interact with phenylalanine, tyrosine, or tryptophan. In addition, countless studies have established the importance of the cation-π interaction in a range of biological processes. Our work has focused on molecular neurobiology, and we have shown that neurotransmitters generally use a cation-π interaction to bind to their receptors. We have also shown that many drug-receptor interactions involve cation-π interactions. A cation-π interaction plays a critical role in the binding of nicotine to ACh receptors in the brain, an especially significant case. Other researchers have established important cation-π interactions in the recognition of the "histone code," in terpene biosynthesis, in chemical catalysis, and in many other systems.

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Year:  2012        PMID: 23214924      PMCID: PMC3957424          DOI: 10.1021/ar300265y

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  42 in total

1.  The Cationminus signpi Interaction.

Authors:  Jennifer C. Ma; Dennis A. Dougherty
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

Review 2.  Lariat ether receptor systems show experimental evidence for alkali metal cation-pi interactions.

Authors:  George W Gokel; Leonard J Barbour; Riccardo Ferdani; Jiaxin Hu
Journal:  Acc Chem Res       Date:  2002-10       Impact factor: 22.384

Review 3.  Cation-pi bonding and amino-aromatic interactions in the biomolecular recognition of substituted ammonium ligands.

Authors:  N S Scrutton; A R Raine
Journal:  Biochem J       Date:  1996-10-01       Impact factor: 3.857

4.  Amino/aromatic interactions in proteins: is the evidence stacked against hydrogen bonding?

Authors:  J B Mitchell; C L Nandi; I K McDonald; J M Thornton; S L Price
Journal:  J Mol Biol       Date:  1994-06-03       Impact factor: 5.469

Review 5.  Aromatic rings in chemical and biological recognition: energetics and structures.

Authors:  Laura M Salonen; Manuel Ellermann; François Diederich
Journal:  Angew Chem Int Ed Engl       Date:  2011-04-28       Impact factor: 15.336

6.  Cation-pi interactions in ligand recognition by serotonergic (5-HT3A) and nicotinic acetylcholine receptors: the anomalous binding properties of nicotine.

Authors:  Darren L Beene; Gabriel S Brandt; Wenge Zhong; Niki M Zacharias; Henry A Lester; Dennis A Dougherty
Journal:  Biochemistry       Date:  2002-08-13       Impact factor: 3.162

7.  Cu(I) recognition via cation-pi and methionine interactions in CusF.

Authors:  Yi Xue; Anna V Davis; Gurusamy Balakrishnan; Jay P Stasser; Benjamin M Staehlin; Pamela Focia; Thomas G Spiro; James E Penner-Hahn; Thomas V O'Halloran
Journal:  Nat Chem Biol       Date:  2007-12-23       Impact factor: 15.040

8.  From ab initio quantum mechanics to molecular neurobiology: a cation-pi binding site in the nicotinic receptor.

Authors:  W Zhong; J P Gallivan; Y Zhang; L Li; H A Lester; D A Dougherty
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

9.  Plant UVR8 photoreceptor senses UV-B by tryptophan-mediated disruption of cross-dimer salt bridges.

Authors:  John M Christie; Andrew S Arvai; Katherine J Baxter; Monika Heilmann; Ashley J Pratt; Andrew O'Hara; Sharon M Kelly; Michael Hothorn; Brian O Smith; Kenichi Hitomi; Gareth I Jenkins; Elizabeth D Getzoff
Journal:  Science       Date:  2012-02-09       Impact factor: 47.728

10.  Nicotine binding to brain receptors requires a strong cation-pi interaction.

Authors:  Xinan Xiu; Nyssa L Puskar; Jai A P Shanata; Henry A Lester; Dennis A Dougherty
Journal:  Nature       Date:  2009-03-01       Impact factor: 49.962

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  168 in total

Review 1.  Implications of aromatic-aromatic interactions: From protein structures to peptide models.

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2.  Antigenic Determinants of the Bilobal Cockroach Allergen Bla g 2.

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Journal:  J Biol Chem       Date:  2015-12-07       Impact factor: 5.157

3.  Insights into Thiol-Aromatic Interactions: A Stereoelectronic Basis for S-H/π Interactions.

Authors:  Christina R Forbes; Sudipta K Sinha; Himal K Ganguly; Shi Bai; Glenn P A Yap; Sandeep Patel; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2017-01-30       Impact factor: 15.419

4.  Identifying key amino acid residues that affect α-conotoxin AuIB inhibition of α3β4 nicotinic acetylcholine receptors.

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Journal:  J Biol Chem       Date:  2013-10-07       Impact factor: 5.157

5.  Protein-ligand interactions: probing the energetics of a putative cation-π interaction.

Authors:  James M Myslinski; John H Clements; Stephen F Martin
Journal:  Bioorg Med Chem Lett       Date:  2014-05-09       Impact factor: 2.823

6.  Parametrization of halogen bonds in the CHARMM general force field: Improved treatment of ligand-protein interactions.

Authors:  Ignacio Soteras Gutiérrez; Fang-Yu Lin; Kenno Vanommeslaeghe; Justin A Lemkul; Kira A Armacost; Charles L Brooks; Alexander D MacKerell
Journal:  Bioorg Med Chem       Date:  2016-06-18       Impact factor: 3.641

7.  A selective inhibitor of PRMT5 with in vivo and in vitro potency in MCL models.

Authors:  Elayne Chan-Penebre; Kristy G Kuplast; Christina R Majer; P Ann Boriack-Sjodin; Tim J Wigle; L Danielle Johnston; Nathalie Rioux; Michael J Munchhof; Lei Jin; Suzanne L Jacques; Kip A West; Trupti Lingaraj; Kimberly Stickland; Scott A Ribich; Alejandra Raimondi; Margaret Porter Scott; Nigel J Waters; Roy M Pollock; Jesse J Smith; Olena Barbash; Melissa Pappalardi; Thau F Ho; Kelvin Nurse; Khyati P Oza; Kathleen T Gallagher; Ryan Kruger; Mikel P Moyer; Robert A Copeland; Richard Chesworth; Kenneth W Duncan
Journal:  Nat Chem Biol       Date:  2015-04-27       Impact factor: 15.040

8.  Cyclic di-AMP, a second messenger of primary importance: tertiary structures and binding mechanisms.

Authors:  Jin He; Wen Yin; Michael Y Galperin; Shan-Ho Chou
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

9.  Toward the Target: Tilorone, Quinacrine, and Pyronaridine Bind to Ebola Virus Glycoprotein.

Authors:  Thomas R Lane; Sean Ekins
Journal:  ACS Med Chem Lett       Date:  2020-07-23       Impact factor: 4.345

10.  Cation-π interactions of methylated ammonium ions: a quantum mechanical study.

Authors:  Chaya Rapp; Elizabeth Goldberger; Nasim Tishbi; Rachel Kirshenbaum
Journal:  Proteins       Date:  2014-02-18
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