Literature DB >> 33462115

Post-transcriptional regulation by the exosome complex is required for cell survival and forebrain development via repression of P53 signaling.

Pauline Antonie Ulmke1, Yuanbin Xie1,2, Godwin Sokpor1,3, Linh Pham1,3, Orr Shomroni4, Tea Berulava5, Joachim Rosenbusch1, Uttiya Basu6, Andre Fischer5,7,8, Huu Phuc Nguyen3, Jochen F Staiger1, Tran Tuoc9,3.   

Abstract

Fine-tuned gene expression is crucial for neurodevelopment. The gene expression program is tightly controlled at different levels, including RNA decay. N6-methyladenosine (m6A) methylation-mediated degradation of RNA is essential for brain development. However, m6A methylation impacts not only RNA stability, but also other RNA metabolism processes. How RNA decay contributes to brain development is largely unknown. Here, we show that Exosc10, a RNA exonuclease subunit of the RNA exosome complex, is indispensable for forebrain development. We report that cortical cells undergo overt apoptosis, culminating in cortical agenesis upon conditional deletion of Exosc10 in mouse cortex. Mechanistically, Exosc10 directly binds and degrades transcripts of the P53 signaling-related genes, such as Aen and Bbc3. Overall, our findings suggest a crucial role for Exosc10 in suppressing the P53 pathway, in which the rapid turnover of the apoptosis effectors Aen and Bbc3 mRNAs is essential for cell survival and normal cortical histogenesis.
© 2021. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Aen and Bbc3; Apoptosis; Cortical development; Exosc10; Exosome complex; P53 pathway; RNA decay

Mesh:

Substances:

Year:  2021        PMID: 33462115      PMCID: PMC7888709          DOI: 10.1242/dev.188276

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  74 in total

1.  GenePaint.org: an atlas of gene expression patterns in the mouse embryo.

Authors:  Axel Visel; Christina Thaller; Gregor Eichele
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  Exome sequencing in a family with intellectual disability, early onset spasticity, and cerebellar atrophy detects a novel mutation in EXOSC3.

Authors:  Ginevra Zanni; Chiara Scotton; Chiara Passarelli; Mingyan Fang; Sabina Barresi; Bruno Dallapiccola; Bin Wu; Francesca Gualandi; Alessandra Ferlini; E Bertini; Wang Wei
Journal:  Neurogenetics       Date:  2013-08-24       Impact factor: 2.660

3.  Interaction profiling identifies the human nuclear exosome targeting complex.

Authors:  Michal Lubas; Marianne S Christensen; Maiken S Kristiansen; Michal Domanski; Lasse G Falkenby; Søren Lykke-Andersen; Jens S Andersen; Andrzej Dziembowski; Torben Heick Jensen
Journal:  Mol Cell       Date:  2011-08-19       Impact factor: 17.970

4.  p53 in the CNS: Perspectives on Development, Stem Cells, and Cancer.

Authors:  Susan M Mendrysa; Sara Ghassemifar; Reem Malek
Journal:  Genes Cancer       Date:  2011-04

Review 5.  BH3-only proteins in apoptosis and beyond: an overview.

Authors:  E Lomonosova; G Chinnadurai
Journal:  Oncogene       Date:  2008-12       Impact factor: 9.867

6.  p53 target gene AEN is a nuclear exonuclease required for p53-dependent apoptosis.

Authors:  T Kawase; H Ichikawa; T Ohta; N Nozaki; F Tashiro; R Ohki; Y Taya
Journal:  Oncogene       Date:  2008-02-11       Impact factor: 9.867

Review 7.  Triggers of apoptosis in the immature brain.

Authors:  Chrysanthy Ikonomidou
Journal:  Brain Dev       Date:  2009-08       Impact factor: 1.961

8.  Gene essentiality and synthetic lethality in haploid human cells.

Authors:  Vincent A Blomen; Peter Májek; Lucas T Jae; Johannes W Bigenzahn; Joppe Nieuwenhuis; Jacqueline Staring; Roberto Sacco; Ferdy R van Diemen; Nadine Olk; Alexey Stukalov; Caleb Marceau; Hans Janssen; Jan E Carette; Keiryn L Bennett; Jacques Colinge; Giulio Superti-Furga; Thijn R Brummelkamp
Journal:  Science       Date:  2015-10-15       Impact factor: 47.728

9.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

10.  WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit.

Authors:  Jing Wang; Suhas Vasaikar; Zhiao Shi; Michael Greer; Bing Zhang
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

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  2 in total

1.  WDR36 Safeguards Self-Renewal and Pluripotency of Human Extended Pluripotent Stem Cells.

Authors:  Shiyu An; Dan Yao; Wenyi Zhang; Hao Sun; Tianyi Yu; Ruizhe Jia; Yang Yang
Journal:  Front Genet       Date:  2022-07-22       Impact factor: 4.772

Review 2.  Emerging Role of m6 A Methylome in Brain Development: Implications for Neurological Disorders and Potential Treatment.

Authors:  Godwin Sokpor; Yuanbin Xie; Huu P Nguyen; Tran Tuoc
Journal:  Front Cell Dev Biol       Date:  2021-05-19
  2 in total

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