Literature DB >> 33458146

The complete mitogenome of the Critically Endangered smalltooth sand tiger shark, Odontaspis ferox (Lamniformes: Odontaspididae).

Noel Vella1, Adriana Vella1.   

Abstract

Here, we report the first complete mitochondrial genome for the smalltooth sand tiger shark, Odontaspis ferox (Risso, 1810). The circular mitochondrial genome was found to be 16,682 bp in length and contains 37 genes, a control region and the replication origin of the L-strand (OL). The base composition of this mitogenome is 32.6% A, 23.3% C, 12.8% G, and 31.3% T. Phylogenetic analysis of Lamniformes indicates that O. ferox did not group with Carcharias taurus and so the taxonomic classification of Odontaspididae needs to be revised. This study promotes conservation genetics for this poorly studied shark species which is listed critically endangered in the Mediterranean Sea.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Mitochondrial genome; Odontaspididae; Odontaspis ferox; phylogeny

Year:  2020        PMID: 33458146      PMCID: PMC7782878          DOI: 10.1080/23802359.2020.1814886

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  29 in total

1.  Conservation of a dinucleotide simple sequence repeat locus in sharks.

Authors:  Andrew P Martin; Amanda T Pardini; Leslie R Noble; Catherine S Jones
Journal:  Mol Phylogenet Evol       Date:  2002-05       Impact factor: 4.286

2.  jModelTest 2: more models, new heuristics and parallel computing.

Authors:  Diego Darriba; Guillermo L Taboada; Ramón Doallo; David Posada
Journal:  Nat Methods       Date:  2012-07-30       Impact factor: 28.547

3.  The complete mitochondrial genome of the big-eye thresher shark, Alopias superciliosus (Chondrichthyes, Alopiidae).

Authors:  Chia-Hao Chang; Kwang-Tsao Shao; Yeong-Shin Lin; Hsuan-Ching Ho; Yun-Chih Liao
Journal:  Mitochondrial DNA       Date:  2013-04-30

4.  Complete mitochondrial genome of the megamouth shark Megachasma pelagios (Chondrichthyes, Megachasmidae).

Authors:  Chia-Hao Chang; Kwang-Tsao Shao; Yeong-Shin Lin; Wei-Chuan Chiang; Nian-Hong Jang-Liaw
Journal:  Mitochondrial DNA       Date:  2013-04-30

5.  A molecular approach towards taxonomic identification of elasmobranch species from Maltese fisheries landings.

Authors:  Adriana Vella; Noel Vella; Sarah Schembri
Journal:  Mar Genomics       Date:  2017-10-03       Impact factor: 1.710

6.  The complete mitochondrial genome of the sand tiger shark, Carcharias taurus (Chondrichthyes, Odontaspididae).

Authors:  Chia-Hao Chang; Rima W Jabado; Yeong-Shin Lin; Kwang-Tsao Shao
Journal:  Mitochondrial DNA       Date:  2014-01-27

7.  Complete mitochondrial genome and the phylogenetic position of the Blotchy swell shark Cephaloscyllium umbratile.

Authors:  Hao Chen; Lingling Lin; Xiao Chen; Weiming Ai; Shaobo Chen
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2015-08-10       Impact factor: 1.514

8.  Complete mitochondrial genome of the porbeagle shark, Lamna nasus (Chondrichthyes, Lamnidae).

Authors:  Píndaro Díaz-Jaimes; Manuel Uribe-Alcocer; Douglas H Adams; Jose Miguel Rangel-Morales; Natalia J Bayona-Vásquez
Journal:  Mitochondrial DNA B Resour       Date:  2016-10-03       Impact factor: 0.658

9.  The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus.

Authors:  Jonathan Gorman; Nicholas Marra; Mahmood S Shivji; Michael J Stanhope
Journal:  Mitochondrial DNA B Resour       Date:  2019-10-18       Impact factor: 0.658

10.  The complete mitochondrial genome and phylogenetic position of the leopard catshark, Poroderma pantherinum.

Authors:  Michaela van Staden; Katie S Gledhill; Clint Rhode; Aletta E Bester-van der Merwe
Journal:  Mitochondrial DNA B Resour       Date:  2018-07-10       Impact factor: 0.658

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