Literature DB >> 33458080

Complete chloroplast genome sequence of Acer nikoense (Sapindaceae).

Qidi Fu1, Xuedan Yu1, Xinhe Xia1, Yongqi Zheng1, Chuanhong Zhang1.   

Abstract

Acer nikoense (Sapindaceae: Acer) is a deciduous tree, belonging to the Ser. Grisea of Sect. Trifoliata. Its complete genome sequence was obtained using genome Illumina pair-end sequencing data. It had a typical quadripartite structure with 155,952 bp in length, consisting of a large single-copy region (85,720 bp) and a small single-copy region (18,072 bp), as well as a pair of inverted repeats (26,080 bp). The total GC content was 37.9%. A total of 113 unique genes were annotated, including 30 tRNAs, 4 rRNAs, and 79 protein-coding genes. The phylogenetic analysis indicated that A. nikoense and A. triflorum were the most closely related.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Acer nikoense; chloroplast genome; phylogenetic analysis

Year:  2020        PMID: 33458080      PMCID: PMC7782346          DOI: 10.1080/23802359.2020.1797574

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  7 in total

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4.  Acerogenin C from Acer nikoense exhibits a neuroprotective effect in mouse hippocampal HT22 cell lines through the upregulation of Nrf-2/HO-1 signaling pathways.

Authors:  Nam-Tae Kim; Dong-Sung Lee; Anisuzzaman Chowdhury; Hwan Lee; Byung-Yoon Cha; Je-Tae Woo; Eun Rhan Woo; Jun-Hyeog Jang
Journal:  Mol Med Rep       Date:  2017-06-02       Impact factor: 2.952

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Authors:  Shin-Ichiro Kurimoto; Yu F Sasaki; Yoshihiro Suyama; Naonobu Tanaka; Yoshiki Kashiwada; Takanori Nakamura
Journal:  Chem Pharm Bull (Tokyo)       Date:  2016       Impact factor: 1.645

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Authors:  Tsukasa Nakamura; Kazunori D Yamada; Kentaro Tomii; Kazutaka Katoh
Journal:  Bioinformatics       Date:  2018-07-15       Impact factor: 6.937

7.  OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets.

Authors:  Marc Lohse; Oliver Drechsel; Sabine Kahlau; Ralph Bock
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  7 in total
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  3 in total

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