Literature DB >> 33457952

Molecular identification and phylogenetic analysis of the mitogenome of Solenaia oleivora MG.

Pengyu Chen1, Danni Li1, Xuxu Chen1, Genfang Zhang2, Shoubao Yang1.   

Abstract

Solenaia oleivora, belongs to Bivalvia, Unionidae, and Gonideinae, is a burrowing bivalve uniquely distributed in China. In this study, the complete mitochondrial genome of S. oleivora MG was sequenced and determined. The complete mitogenome of S. oleivora MG is 16,392 bp in total length, consist of 22 tRNA genes, 13 protein-coding genes (PCGs), and 2 rRNA genes. The overall base composition of the S. oleivora MG mitogenome is 36.90% A, 23.85% T, 27.09% C, and 12.16% G, respectively, exhibits a similar AT bias (60.75%) feature to other invertebrate bivalve mitogenomes. The phylogenetic analysis that S. oleivora MG clustered in genus Solenaia. This result provides useful data to the conservation and sustainable utilization of S. oleivora MG and other invertebrate mussels.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  phylogenetic analysis; Solenaia oleivora MG; mitogenome; molecular identification

Year:  2020        PMID: 33457952      PMCID: PMC7782228          DOI: 10.1080/23802359.2020.1788435

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  11 in total

1.  The complete nucleotide sequence of the Crossostoma lacustre mitochondrial genome: conservation and variations among vertebrates.

Authors:  C S Tzeng; C F Hui; S C Shen; P C Huang
Journal:  Nucleic Acids Res       Date:  1992-09-25       Impact factor: 16.971

2.  The complete F-type mitochondrial genome of threatened Chinese freshwater mussel Solenaia oleivora (Bivalvia: Unionidae: Gonideinae).

Authors:  Xiao-Chen Huang; Chun-Hua Zhou; Shan Ouyang; Xiao-Ping Wu
Journal:  Mitochondrial DNA       Date:  2013-09-11

3.  The complete mitochondrial genome sequence of Margaritiana dahurica Middendorff.

Authors:  Shoubao Yang; Zhongxiang Mi; Gang Tao; Xiaofeng Liu; Min Wei; Heng Wang
Journal:  Mitochondrial DNA       Date:  2014-03-11

4.  Complete mitochondrial genome of Pseudorasbora elongata (Cypriniformes: Cyprinidae): sequencing and analysis.

Authors:  Liping He; Shoubao Yang; Daheng Zheng; Chen Li; Gang Tao; Min Wei; Heng Wang
Journal:  Mitochondrial DNA       Date:  2013-07-16

5.  The complete mitochondrial genome sequence of the cutlassfish Trichiurus japonicus (Perciformes: Trichiuridae): Genome characterization and phylogenetic considerations.

Authors:  Yuan Liu; Zhaoxia Cui
Journal:  Mar Genomics       Date:  2009-08-26       Impact factor: 1.710

6.  The complete maternally and paternally inherited mitochondrial genomes of the endangered freshwater mussel Solenaia carinatus (Bivalvia: Unionidae) and implications for Unionidae taxonomy.

Authors:  Xiao-Chen Huang; Jun Rong; Yong Liu; Ming-Hua Zhang; Yuan Wan; Shan Ouyang; Chun-Hua Zhou; Xiao-Ping Wu
Journal:  PLoS One       Date:  2013-12-17       Impact factor: 3.240

7.  Analysis of mitochondrial genomes resolves the phylogenetic position of Chinese freshwater mussels (Bivalvia, Unionidae).

Authors:  Rui-Wen Wu; Xiong-Jun Liu; Sa Wang; Kevin J Roe; Shan Ouyang; Xiao-Ping Wu
Journal:  Zookeys       Date:  2019-01-03       Impact factor: 1.546

8.  Eight new freshwater mussels (Unionidae) from tropical Asia.

Authors:  Ivan N Bolotov; Ekaterina S Konopleva; Ilya V Vikhrev; Manuel Lopes-Lima; Arthur E Bogan; Zau Lunn; Nyein Chan; Than Win; Olga V Aksenova; Mikhail Yu Gofarov; Alena A Tomilova; Alexander V Kondakov
Journal:  Sci Rep       Date:  2019-08-19       Impact factor: 4.379

9.  Eurotatorian paraphyly: Revisiting phylogenetic relationships based on the complete mitochondrial genome sequence of Rotaria rotatoria (Bdelloidea: Rotifera: Syndermata).

Authors:  Gi-Sik Min; Joong-Ki Park
Journal:  BMC Genomics       Date:  2009-11-17       Impact factor: 3.969

10.  Testing the utility of DNA barcodes and a preliminary phylogenetic framework for Chinese freshwater mussels (Bivalvia: Unionidae) from the middle and lower Yangtze River.

Authors:  Rui-Wen Wu; Yi-Tong Liu; Sa Wang; Xiong-Jun Liu; David T Zanatta; Kevin J Roe; Xue-Lin Song; Chang-Ting An; Xiao-Ping Wu
Journal:  PLoS One       Date:  2018-08-08       Impact factor: 3.240

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