Literature DB >> 33457895

Identification and phylogenetic analysis of the mitochondrial genome of Hemibarbus labeo BML (Cypriniformes: Cyprinidae).

Yuting Sun1, Qilin Wang1, Jiangfeng Ren2, Shoubao Yang1.   

Abstract

The complete mitochondrial genome of Hemibarbus labeo BML (Cypriniformes: Cyprinidae) is 16,612 bases in length. It consists of 22 tRNA genes, 13 protein-coding genes, 2 rRNA genes, and 1 non-coding region. Its overall nucleotide composition is A: 29.85%, G: 17.07%, T: 25.86%, and C: 27.23%, respectively, with an A + T rich feature (55.71%). The gene arrangement and organization of the mitogenome from H. labeo BML were very similar to other Cyprinidae fishes. The phylogenetic analysis showed that H. labeo BML clustered in genus Hemibarbus. These results will contribute to the taxonomy and conservation biology studies of H. labeo.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  phylogenetic analysis; Hemibarbus labeo BML; Mitochondrial genome; identification

Year:  2020        PMID： 33457895      PMCID： PMC7782797          DOI： 10.1080/23802359.2020.1778570

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  10 in total

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Authors:  C S Tzeng; C F Hui; S C Shen; P C Huang
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Journal:  Mitochondrial DNA       Date:  2012-09-20

3.  Molecular characterization of a MOSPD2 homolog in the barbel steed (Hemibarbus labeo) and its involvement in monocyte/macrophage and neutrophil migration.

Authors:  Wei Jiang; Jie Chen; Zhi-Ping Guo; Le Zhang; Guang-Ping Chen
Journal:  Mol Immunol       Date:  2020-01-09       Impact factor: 4.407

4.  The complete mitochondrial DNA sequence of the Mekong giant catfish (Pangasianodon gigas), and the phylogenetic relationships among Siluriformes.

Authors:  Amnuay Jondeung; Pradit Sangthong; Rafael Zardoya
Journal:  Gene       Date:  2006-08-23       Impact factor: 3.688

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Authors:  Liping He; Shoubao Yang; Daheng Zheng; Chen Li; Gang Tao; Min Wei; Heng Wang
Journal:  Mitochondrial DNA       Date:  2013-07-16

6.  Host defense peptide LEAP-2 contributes to monocyte/macrophage polarization in barbel steed (Hemibarbus labeo).

Authors:  Jie Chen; Yao-Ping Lv; Qing-Min Dai; Ze-Hui Hu; Zi-Ming Liu; Ji-Heng Li
Journal:  Fish Shellfish Immunol       Date:  2019-01-11       Impact factor: 4.581

7.  Phylogenetic relationships among three new Hemibarbus mitogenome sequences belonging to the subfamily Gobioninae (Teleostei, Cypriniformes, and Cyprinidae).

Authors:  Keun-Yong Kim; Yoon Hee Lim; In-Chul Bang; Yoon Kwon Nam
Journal:  Mitochondrial DNA       Date:  2009-12

8.  Newly identified gene muscle segment homeobox C may play a role in intermuscular bone development of Hemibarbus labeo.

Authors:  Y P Lv; W J Yao; J Chen; B L Bao
Journal:  Genet Mol Res       Date:  2015-09-22

9.  The complete mitochondrial genome of Pseudobagrus ondon Shaw.

Authors:  Heng Wang; Chen Li; Xiaoxue Yang; Shoubao Yang; Jiwei Han; Liping He; Min Wei; Chong Chen; Lingchao Cai
Journal:  Mitochondrial DNA       Date:  2013-10-01

10.  Eurotatorian paraphyly: Revisiting phylogenetic relationships based on the complete mitochondrial genome sequence of Rotaria rotatoria (Bdelloidea: Rotifera: Syndermata).

Authors:  Gi-Sik Min; Joong-Ki Park
Journal:  BMC Genomics       Date:  2009-11-17       Impact factor: 3.969
  10 in total

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