Literature DB >> 33457859

The complete mitogenome of the Chionoecetes opilio (Crustacea: Decapoda: Oregoniidae) and its unique characteristics.

Jin-Hyeop Jeong1, Seongho Ryu2, Won Kim1.   

Abstract

The complete mitochondrial genome of Chionoecetes opilio is a 16,067 bp long, circular molecule which contains 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA genes (rRNAs). Its gene contents and organization are generally similar to other majoid mitogenomes. However, the mitogenome shows unique characteristics; long terminal amino acids, loss or addition of 3 PCGs, a 1216 bp long putative D-loop region, and peculiar secondary structures of 5 tRNAs. The concatenated amino acid sequences of 13 PCGs were used to analyze the phylogenetic tree, which well supported the monophyly of brachyuran clades of Majoidea, Heterotremata, Thoracotremata, and Eubrachyura.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chionoecetes opilio; Decapoda; Majoidea; Mitogenome; atypical tRNAs

Year:  2020        PMID： 33457859      PMCID： PMC7782958          DOI： 10.1080/23802359.2020.1780974

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  8 in total

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Journal:  Nucleic Acids Res       Date:  2019-06-20       Impact factor: 16.971

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Authors:  Matthias Bernt; Alexander Donath; Frank Jühling; Fabian Externbrink; Catherine Florentz; Guido Fritzsch; Joern Pütz; Martin Middendorf; Peter F Stadler
Journal:  Mol Phylogenet Evol       Date:  2012-09-07       Impact factor: 4.286

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Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

7.  The highly rearranged mitochondrial genomes of the crabs Maja crispata and Maja squinado (Majidae) and gene order evolution in Brachyura.

Authors:  Andrea Basso; Massimiliano Babbucci; Marianna Pauletto; Emilio Riginella; Tomaso Patarnello; Enrico Negrisolo
Journal:  Sci Rep       Date:  2017-06-22       Impact factor: 4.379

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Authors:  Mustafa Zafer Karagozlu; Michelle M Barbon; Thinh Do Dinh; Cesar G Demayo; Chang-Bae Kim
Journal:  Mitochondrial DNA B Resour       Date:  2018-02-10       Impact factor: 0.658
  8 in total
  1 in total

1.  The complete mitochondrial genome of Chionoecetes japonicus (Crustacea: Decapoda: Majoidea).

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Journal:  Mitochondrial DNA B Resour       Date:  2020-10-07       Impact factor: 0.658
  1 in total

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