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Literature DB >> 33457836

The complete plastid genome of an evergreen tree Litsea elongata (Lauraceae: Laureae).

Chao Liu¹, Huanhuan Chen¹, Lihong Han¹, Lizhou Tang¹.

Abstract

Litsea elongata (Nees) J. D. Hooker is an economically important timber and medicine tree. In this study, the complete plastid genome of L. elongata was assembled and analyzed. The plastid genome mapped a 154,027 bp circular DNA molecule with a GC content of 39.2%, consisting of a large single-copy region (LSC) of 93,688 bp, a small single-copy region (SSC) of 18,851 bp, and two inverted repeat regions (IRa and Irb) of 20,744 bp. A total of 127 genes were detected in the plastid genome, including eight ribosomal RNA (rRNA) genes, 36 transfer RNA (tRNA) genes, and 83 protein-coding genes. Phylogenomic analysis based on 39 complete plastomes of Laureae in the family Lauraceae supports the close relationships among L. coreana, L. elongata, L. japonica, and L. pierrei.

Entities: CellLine Disease Species

Keywords: Litsea; chloroplast; phylogeny

Year: 2020 PMID： 33457836 PMCID： PMC7781995 DOI： 10.1080/23802359.2020.1778566

Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658

5 in total

1. Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids.

Authors: Yu Song; Wen-Bin Yu; Yunhong Tan; Bing Liu; Xin Yao; Jianjun Jin; Michael Padmanaba; Jun-Bo Yang; Richard T Corlett
Journal: Genome Biol Evol Date: 2017-09-01 Impact factor: 3.416

2. Plastome sequences help to improve the systematic position of trinerved Lindera species in the family Lauraceae.

Authors: Xiangyu Tian; Junwei Ye; Yu Song
Journal: PeerJ Date: 2019-10-07 Impact factor: 2.984

3. Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae).

Authors: Qiong Liao; Tinghong Ye; Yu Song
Journal: Mitochondrial DNA B Resour Date: 2018-10-31 Impact factor: 0.658

4. Comparative chloroplast genomics and phylogenetics of nine Lindera species (Lauraceae).

Authors: Mei-Li Zhao; Yu Song; Jun Ni; Xin Yao; Yun-Hong Tan; Zeng-Fu Xu
Journal: Sci Rep Date: 2018-06-11 Impact factor: 4.379

5. Characterization of 20 complete plastomes from the tribe Laureae (Lauraceae) and distribution of small inversions.

Authors: Sangjin Jo; Young-Kee Kim; Se-Hwan Cheon; Qiang Fan; Ki-Joong Kim
Journal: PLoS One Date: 2019-11-01 Impact factor: 3.240

5 in total

3 in total

The complete plastid genome of an evergreen tree Litsea elongata (Lauraceae: Laureae).

1. Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids.

2. Plastome sequences help to improve the systematic position of trinerved Lindera species in the family Lauraceae.

3. Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae).

4. Comparative chloroplast genomics and phylogenetics of nine Lindera species (Lauraceae).

5. Characterization of 20 complete plastomes from the tribe Laureae (Lauraceae) and distribution of small inversions.

1. The complete plastid genome of a medicinal tree Lindera chienii Cheng 1934 (Lauraceae: Laureae).

2. Plastid genome evolution of a monophyletic group in the subtribe Lauriineae (Laureae, Lauraceae).

3. Complete plastid genome of Litsea honghoensis Liou 1933, an endangered evergreen species in China.