Literature DB >> 33457747

Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae).

Qi Wang1.   

Abstract

Muhlenbergia capillaris (Lam.) Trin. is an ornamental grass belonging to the genus Muhlenbergia Schreb. in the family Poaceae. To better understand its phylogenetic relationship with respect to the other species in the tribe Chloridoideae, the first complete chloroplast genome of Muhlenbergia was determined. The complete chloroplast genome of Muhlenbergia capillaris is 134,907 bp in length, consisting of one large single-copy (LSC) region of 80,175 bp, one small single-copy (SSC) region of 12,706 bp, and a pair of inverted repeat (IR) regions of 21,013 bp. The overall GC content of the genome is 38.1%. Further, maximum likelihood phylogenetic analysis with TVM + F+R3 model was conducted using 28 complete plastomes of the Poaceae, which support close relationships among species of Muhlenbergia, Hilaria Kunth, Distichlis Raf., and Bouteloua Lag., followed by those of Tragus Haller.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloridoideae; chloroplast genome; relationship

Year:  2020        PMID: 33457747      PMCID: PMC7781977          DOI: 10.1080/23802359.2020.1764403

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  3 in total

1.  A phylogeny and classification of the Muhlenbergiinae (Poaceae: Chloridoideae: Cynodonteae) based on plastid and nuclear DNA sequences.

Authors:  Paul M Peterson; Konstantin Romaschenko; Gabriel Johnson
Journal:  Am J Bot       Date:  2010-08-23       Impact factor: 3.844

2.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

3.  Recent range expansion in Australian hummock grasses (Triodia) inferred using genotyping-by-sequencing.

Authors:  Benjamin M Anderson; Kevin R Thiele; Pauline F Grierson; Siegfried L Krauss; Paul G Nevill; Ian D Small; Xiao Zhong; Matthew D Barrett
Journal:  AoB Plants       Date:  2019-03-28       Impact factor: 3.276

  3 in total

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