Literature DB >> 33457181

Deep Learning applications for COVID-19.

Connor Shorten1, Taghi M Khoshgoftaar1, Borko Furht1.   

Abstract

This survey explores how Deep Learning has battled the COVID-19 pandemic and provides directions for future research on COVID-19. We cover Deep Learning applications in Natural Language Processing, Computer Vision, Life Sciences, and Epidemiology. We describe how each of these applications vary with the availability of big data and how learning tasks are constructed. We begin by evaluating the current state of Deep Learning and conclude with key limitations of Deep Learning for COVID-19 applications. These limitations include Interpretability, Generalization Metrics, Learning from Limited Labeled Data, and Data Privacy. Natural Language Processing applications include mining COVID-19 research for Information Retrieval and Question Answering, as well as Misinformation Detection, and Public Sentiment Analysis. Computer Vision applications cover Medical Image Analysis, Ambient Intelligence, and Vision-based Robotics. Within Life Sciences, our survey looks at how Deep Learning can be applied to Precision Diagnostics, Protein Structure Prediction, and Drug Repurposing. Deep Learning has additionally been utilized in Spread Forecasting for Epidemiology. Our literature review has found many examples of Deep Learning systems to fight COVID-19. We hope that this survey will help accelerate the use of Deep Learning for COVID-19 research.
© The Author(s) 2021.

Entities:  

Keywords:  COVID-19; Computer Vision; Deep Learning applications; Epidemiology; Life Sciences; Natural Language Processing

Year:  2021        PMID: 33457181      PMCID: PMC7797891          DOI: 10.1186/s40537-020-00392-9

Source DB:  PubMed          Journal:  J Big Data        ISSN: 2196-1115


  27 in total

1.  An estimation of the number of cells in the human body.

Authors:  Eva Bianconi; Allison Piovesan; Federica Facchin; Alina Beraudi; Raffaella Casadei; Flavia Frabetti; Lorenza Vitale; Maria Chiara Pelleri; Simone Tassani; Francesco Piva; Soledad Perez-Amodio; Pierluigi Strippoli; Silvia Canaider
Journal:  Ann Hum Biol       Date:  2013-07-05       Impact factor: 1.533

2.  Medical error-the third leading cause of death in the US.

Authors:  Martin A Makary; Michael Daniel
Journal:  BMJ       Date:  2016-05-03

3.  Artificial intelligence-enabled rapid diagnosis of patients with COVID-19.

Authors:  Xueyan Mei; Hao-Chih Lee; Kai-Yue Diao; Mingqian Huang; Bin Lin; Chenyu Liu; Zongyu Xie; Yixuan Ma; Philip M Robson; Michael Chung; Adam Bernheim; Venkatesh Mani; Claudia Calcagno; Kunwei Li; Shaolin Li; Hong Shan; Jian Lv; Tongtong Zhao; Junli Xia; Qihua Long; Sharon Steinberger; Adam Jacobi; Timothy Deyer; Marta Luksza; Fang Liu; Brent P Little; Zahi A Fayad; Yang Yang
Journal:  Nat Med       Date:  2020-05-19       Impact factor: 53.440

Review 4.  Network medicine: a network-based approach to human disease.

Authors:  Albert-László Barabási; Natali Gulbahce; Joseph Loscalzo
Journal:  Nat Rev Genet       Date:  2011-01       Impact factor: 53.242

5.  Critical assessment of methods of protein structure prediction (CASP)-Round XIII.

Authors:  Andriy Kryshtafovych; Torsten Schwede; Maya Topf; Krzysztof Fidelis; John Moult
Journal:  Proteins       Date:  2019-10-23

Review 6.  A review of statistical and machine learning methods for modeling cancer risk using structured clinical data.

Authors:  Aaron N Richter; Taghi M Khoshgoftaar
Journal:  Artif Intell Med       Date:  2018-07-14       Impact factor: 5.326

7.  Detection of COVID-19 Infection from Routine Blood Exams with Machine Learning: A Feasibility Study.

Authors:  Davide Brinati; Andrea Campagner; Davide Ferrari; Massimo Locatelli; Giuseppe Banfi; Federico Cabitza
Journal:  J Med Syst       Date:  2020-07-01       Impact factor: 4.460

8.  Baricitinib as potential treatment for 2019-nCoV acute respiratory disease.

Authors:  Peter Richardson; Ivan Griffin; Catherine Tucker; Dan Smith; Olly Oechsle; Anne Phelan; Michael Rawling; Edward Savory; Justin Stebbing
Journal:  Lancet       Date:  2020-02-04       Impact factor: 79.321

9.  MIMIC-III, a freely accessible critical care database.

Authors:  Alistair E W Johnson; Tom J Pollard; Lu Shen; Li-Wei H Lehman; Mengling Feng; Mohammad Ghassemi; Benjamin Moody; Peter Szolovits; Leo Anthony Celi; Roger G Mark
Journal:  Sci Data       Date:  2016-05-24       Impact factor: 6.444

Review 10.  The future of digital health with federated learning.

Authors:  Nicola Rieke; Jonny Hancox; Wenqi Li; Fausto Milletarì; Holger R Roth; Shadi Albarqouni; Spyridon Bakas; Mathieu N Galtier; Bennett A Landman; Klaus Maier-Hein; Sébastien Ourselin; Micah Sheller; Ronald M Summers; Andrew Trask; Daguang Xu; Maximilian Baust; M Jorge Cardoso
Journal:  NPJ Digit Med       Date:  2020-09-14
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  34 in total

1.  Review of deep learning: concepts, CNN architectures, challenges, applications, future directions.

Authors:  Laith Alzubaidi; Jinglan Zhang; Amjad J Humaidi; Ayad Al-Dujaili; Ye Duan; Omran Al-Shamma; J Santamaría; Mohammed A Fadhel; Muthana Al-Amidie; Laith Farhan
Journal:  J Big Data       Date:  2021-03-31

2.  Estimating the impact of interventions against COVID-19: From lockdown to vaccination.

Authors:  James Thompson; Stephen Wattam
Journal:  PLoS One       Date:  2021-12-17       Impact factor: 3.240

Review 3.  New Insights Into Drug Repurposing for COVID-19 Using Deep Learning.

Authors:  Chun Yen Lee; Yi-Ping Phoebe Chen
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2021-10-27       Impact factor: 10.451

Review 4.  Machine Learning: Algorithms, Real-World Applications and Research Directions.

Authors:  Iqbal H Sarker
Journal:  SN Comput Sci       Date:  2021-03-22

5.  Contribution of Deep-Learning Techniques Toward Fighting COVID-19: A Bibliometric Analysis of Scholarly Production During 2020.

Authors:  Janneth Chicaiza; Stephany D Villota; Paola G Vinueza-Naranjo; Ruben Rumipamba-Zambrano
Journal:  IEEE Access       Date:  2022-03-11       Impact factor: 3.476

6.  Security Evaluation of Financial and Insurance and Ruin Probability Analysis Integrating Deep Learning Models.

Authors:  Yang Yang
Journal:  Comput Intell Neurosci       Date:  2022-06-08

7.  Dual attention-based sequential auto-encoder for Covid-19 outbreak forecasting: A case study in Vietnam.

Authors:  Phu Pham; Witold Pedrycz; Bay Vo
Journal:  Expert Syst Appl       Date:  2022-05-13       Impact factor: 8.665

8.  Unreferenced English articles' translation quality-oriented automatic evaluation technology using sparse autoencoder under the background of deep learning.

Authors:  Hanhui Li; Jie Deng
Journal:  PLoS One       Date:  2022-07-13       Impact factor: 3.752

9.  Text Data Augmentation for Deep Learning.

Authors:  Connor Shorten; Taghi M Khoshgoftaar; Borko Furht
Journal:  J Big Data       Date:  2021-07-19

10.  The forecast of COVID-19 spread risk at the county level.

Authors:  Murtadha D Hssayeni; Arjuna Chala; Roger Dev; Lili Xu; Jesse Shaw; Borko Furht; Behnaz Ghoraani
Journal:  J Big Data       Date:  2021-07-07
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