Literature DB >> 34919576

Estimating the impact of interventions against COVID-19: From lockdown to vaccination.

James Thompson1, Stephen Wattam2.   

Abstract

Coronavirus disease 2019 (COVID-19) is an infectious disease of humans caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Since the first case was identified in China in December 2019 the disease has spread worldwide, leading to an ongoing pandemic. In this article, we present an agent-based model of COVID-19 in Luxembourg, and use it to estimate the impact, on cases and deaths, of interventions including testing, contact tracing, lockdown, curfew and vaccination. Our model is based on collation, with agents performing activities and moving between locations accordingly. The model is highly heterogeneous, featuring spatial clustering, over 2000 behavioural types and a 10 minute time resolution. The model is validated against COVID-19 clinical monitoring data collected in Luxembourg in 2020. Our model predicts far fewer cases and deaths than the equivalent equation-based SEIR model. In particular, with R0 = 2.45, the SEIR model infects 87% of the resident population while our agent-based model infects only around 23% of the resident population. Our simulations suggest that testing and contract tracing reduce cases substantially, but are less effective at reducing deaths. Lockdowns are very effective although costly, while the impact of an 11pm-6am curfew is relatively small. When vaccinating against a future outbreak, our results suggest that herd immunity can be achieved at relatively low coverage, with substantial levels of protection achieved with only 30% of the population fully immune. When vaccinating in the midst of an outbreak, the challenge is more difficult. In this context, we investigate the impact of vaccine efficacy, capacity, hesitancy and strategy. We conclude that, short of a permanent lockdown, vaccination is by far the most effective way to suppress and ultimately control the spread of COVID-19.

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Year:  2021        PMID: 34919576      PMCID: PMC8683038          DOI: 10.1371/journal.pone.0261330

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  42 in total

1.  A mathematical model reveals the influence of population heterogeneity on herd immunity to SARS-CoV-2.

Authors:  Tom Britton; Frank Ball; Pieter Trapman
Journal:  Science       Date:  2020-06-23       Impact factor: 47.728

2.  Once we have it, will we use it? A European survey on willingness to be vaccinated against COVID-19.

Authors:  Sebastian Neumann-Böhme; Nirosha Elsem Varghese; Iryna Sabat; Pedro Pita Barros; Werner Brouwer; Job van Exel; Jonas Schreyögg; Tom Stargardt
Journal:  Eur J Health Econ       Date:  2020-09

3.  Strategic spatiotemporal vaccine distribution increases the survival rate in an infectious disease like Covid-19.

Authors:  Jens Grauer; Hartmut Löwen; Benno Liebchen
Journal:  Sci Rep       Date:  2020-12-09       Impact factor: 4.379

4.  COMOKIT: A Modeling Kit to Understand, Analyze, and Compare the Impacts of Mitigation Policies Against the COVID-19 Epidemic at the Scale of a City.

Authors:  Benoit Gaudou; Nghi Quang Huynh; Damien Philippon; Arthur Brugière; Kevin Chapuis; Patrick Taillandier; Pierre Larmande; Alexis Drogoul
Journal:  Front Public Health       Date:  2020-09-24

5.  INFEKTA-An agent-based model for transmission of infectious diseases: The COVID-19 case in Bogotá, Colombia.

Authors:  Jonatan Gomez; Jeisson Prieto; Elizabeth Leon; Arles Rodríguez
Journal:  PLoS One       Date:  2021-02-19       Impact factor: 3.240

6.  Returning to a normal life via COVID-19 vaccines in the USA: a large-scale agent-based simulation study.

Authors:  Junjiang Li; Philippe Giabbanelli
Journal:  JMIR Med Inform       Date:  2021-04-14

7.  What the reproductive number R0 can and cannot tell us about COVID-19 dynamics.

Authors:  Clara L Shaw; David A Kennedy
Journal:  Theor Popul Biol       Date:  2021-01-05       Impact factor: 1.570

8.  Data-based analysis, modelling and forecasting of the COVID-19 outbreak.

Authors:  Cleo Anastassopoulou; Lucia Russo; Athanasios Tsakris; Constantinos Siettos
Journal:  PLoS One       Date:  2020-03-31       Impact factor: 3.240

9.  Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV-2).

Authors:  Ruiyun Li; Sen Pei; Bin Chen; Yimeng Song; Tao Zhang; Wan Yang; Jeffrey Shaman
Journal:  Science       Date:  2020-03-16       Impact factor: 47.728

10.  OpenABM-Covid19-An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing.

Authors:  Robert Hinch; William J M Probert; Anel Nurtay; Michelle Kendall; Chris Wymant; Matthew Hall; Katrina Lythgoe; Ana Bulas Cruz; Lele Zhao; Andrea Stewart; Luca Ferretti; Daniel Montero; James Warren; Nicole Mather; Matthew Abueg; Neo Wu; Olivier Legat; Katie Bentley; Thomas Mead; Kelvin Van-Vuuren; Dylan Feldner-Busztin; Tommaso Ristori; Anthony Finkelstein; David G Bonsall; Lucie Abeler-Dörner; Christophe Fraser
Journal:  PLoS Comput Biol       Date:  2021-07-12       Impact factor: 4.475

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  4 in total

1.  Vaccination and Government Stringent Control as Effective Strategies in Preventing SARS-CoV-2 Infections: A Global Perspective.

Authors:  Peng Yang; Zhe Yang; Chenxi Zhao; Xinrui Li; Zhongjun Shao; Kun Liu; Lei Shang
Journal:  Front Public Health       Date:  2022-06-24

2.  A Needs-Based Analysis of Teaching on Vaccinations and COVID-19 in German Medical Schools.

Authors:  Franziska Baessler; Ali Zafar; Katharina Mengler; Ricarda Nadine Natus; Anne Josephine Dutt; Manuel Kuhlmann; Emre Çinkaya; Simon Hennes
Journal:  Vaccines (Basel)       Date:  2022-06-19

3.  The impact of vaccination on the spread of COVID-19: Studying by a mathematical model.

Authors:  Bo Yang; Zhenhua Yu; Yuanli Cai
Journal:  Physica A       Date:  2021-12-12       Impact factor: 3.263

4.  Estimating the seroprevalence of SARS-CoV-2 antibodies: Understanding population-level immunity in Albania at the end of the Alpha variant wave.

Authors:  Fabian Cenko; Alban Ylli; Margarita Prifti; Erkena Shyti; Erina Lazri; Melissa J Perry; Genc Sulcebe
Journal:  J Glob Health       Date:  2022-07-25       Impact factor: 7.664

  4 in total

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