Literature DB >> 33452396

Genetic landscape of 6089 inherited retinal dystrophies affected cases in Spain and their therapeutic and extended epidemiological implications.

Irene Perea-Romero1,2, Gema Gordo1, Ionut F Iancu1,2, Marta Corton3,4, Carmen Ayuso5,6, Marta Del Pozo-Valero1,2, Berta Almoguera1,2, Fiona Blanco-Kelly1,2, Ester Carreño7, Belen Jimenez-Rolando7, Rosario Lopez-Rodriguez1, Isabel Lorda-Sanchez1,2, Inmaculada Martin-Merida1,2, Lucia Pérez de Ayala1, Rosa Riveiro-Alvarez1,2, Elvira Rodriguez-Pinilla1, Saoud Tahsin-Swafiri1,2, Maria J Trujillo-Tiebas1,2, Blanca Garcia-Sandoval2,7, Pablo Minguez1,2, Almudena Avila-Fernandez1,2.   

Abstract

Inherited retinal diseases (IRDs), defined by dysfunction or progressive loss of photoreceptors, are disorders characterized by elevated heterogeneity, both at the clinical and genetic levels. Our main goal was to address the genetic landscape of IRD in the largest cohort of Spanish patients reported to date. A retrospective hospital-based cross-sectional study was carried out on 6089 IRD affected individuals (from 4403 unrelated families), referred for genetic testing from all the Spanish autonomous communities. Clinical, demographic and familiar data were collected from each patient, including family pedigree, age of appearance of visual symptoms, presence of any systemic findings and geographical origin. Genetic studies were performed to the 3951 families with available DNA using different molecular techniques. Overall, 53.2% (2100/3951) of the studied families were genetically characterized, and 1549 different likely causative variants in 142 genes were identified. The most common phenotype encountered is retinitis pigmentosa (RP) (55.6% of families, 2447/4403). The most recurrently mutated genes were PRPH2, ABCA4 and RS1 in autosomal dominant (AD), autosomal recessive (AR) and X-linked (XL) NON-RP cases, respectively; RHO, USH2A and RPGR in AD, AR and XL for non-syndromic RP; and USH2A and MYO7A in syndromic IRD. Pathogenic variants c.3386G > T (p.Arg1129Leu) in ABCA4 and c.2276G > T (p.Cys759Phe) in USH2A were the most frequent variants identified. Our study provides the general landscape for IRD in Spain, reporting the largest cohort ever presented. Our results have important implications for genetic diagnosis, counselling and new therapeutic strategies to both the Spanish population and other related populations.

Entities:  

Year:  2021        PMID: 33452396      PMCID: PMC7810997          DOI: 10.1038/s41598-021-81093-y

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  45 in total

1.  Inherited retinal disease in Norway - a characterization of current clinical and genetic knowledge.

Authors:  Josephine Prener Holtan; Kaja Kristine Selmer; Ketil Riddervold Heimdal; Ragnheiður Bragadóttir
Journal:  Acta Ophthalmol       Date:  2019-08-19       Impact factor: 3.761

2.  The USH2A c.2299delG mutation: dating its common origin in a Southern European population.

Authors:  Elena Aller; Lise Larrieu; Teresa Jaijo; David Baux; Carmen Espinós; Fernando González-Candelas; Carmen Nájera; Francesc Palau; Mireille Claustres; Anne-Françoise Roux; José M Millán
Journal:  Eur J Hum Genet       Date:  2010-02-10       Impact factor: 4.246

3.  Identification of the gene (BBS1) most commonly involved in Bardet-Biedl syndrome, a complex human obesity syndrome.

Authors:  Kirk Mykytyn; Darryl Y Nishimura; Charles C Searby; Mythreyi Shastri; Hsan-jan Yen; John S Beck; Terry Braun; Luan M Streb; Alberto S Cornier; Gerald F Cox; Anne B Fulton; Rivka Carmi; Güven Lüleci; Settara C Chandrasekharappa; Francis S Collins; Samuel G Jacobson; John R Heckenlively; Richard G Weleber; Edwin M Stone; Val C Sheffield
Journal:  Nat Genet       Date:  2002-07-15       Impact factor: 38.330

4.  Phenotypic features of CRB1-associated early-onset severe retinal dystrophy and the different molecular approaches to identifying the disease-causing variants.

Authors:  Bohdan Kousal; Lubica Dudakova; Renata Gaillyova; Michaela Hejtmankova; Pavel Diblik; Michel Michaelides; Petra Liskova
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2016-04-25       Impact factor: 3.117

5.  Outcome of ABCA4 disease-associated alleles in autosomal recessive retinal dystrophies: retrospective analysis in 420 Spanish families.

Authors:  Rosa Riveiro-Alvarez; Miguel-Angel Lopez-Martinez; Jana Zernant; Jana Aguirre-Lamban; Diego Cantalapiedra; Almudena Avila-Fernandez; Ascension Gimenez; Maria-Isabel Lopez-Molina; Blanca Garcia-Sandoval; Fiona Blanco-Kelly; Marta Corton; Sorina Tatu; Patricia Fernandez-San Jose; Maria-Jose Trujillo-Tiebas; Carmen Ramos; Rando Allikmets; Carmen Ayuso
Journal:  Ophthalmology       Date:  2013-06-04       Impact factor: 12.079

6.  Impact of whole exome sequencing among Iranian patients with autosomal recessive retinitis pigmentosa.

Authors:  Maryam Beheshtian; Samira Saee Rad; Mojgan Babanejad; Marzieh Mohseni; Hassan Hashemi; Arash Eshghabadi; Fedra Hajizadeh; Mohammad Reza Akbari; Kimia Kahrizi; Mohammad Riazi Esfahani; Hossein Najmabadi
Journal:  Arch Iran Med       Date:  2015-11       Impact factor: 1.354

7.  Mutation analysis of 272 Spanish families affected by autosomal recessive retinitis pigmentosa using a genotyping microarray.

Authors:  Almudena Ávila-Fernández; Diego Cantalapiedra; Elena Aller; Elena Vallespín; Jana Aguirre-Lambán; Fiona Blanco-Kelly; M Corton; Rosa Riveiro-Álvarez; Rando Allikmets; María José Trujillo-Tiebas; José M Millán; Frans P M Cremers; Carmen Ayuso
Journal:  Mol Vis       Date:  2010-12-03       Impact factor: 2.367

8.  Genetic Mutation Profiles in Korean Patients with Inherited Retinal Diseases.

Authors:  Min Seok Kim; Kwangsic Joo; Moon Woo Seong; Man Jin Kim; Kyu Hyung Park; Sung Sup Park; Se Joon Woo
Journal:  J Korean Med Sci       Date:  2019-06-02       Impact factor: 2.153

9.  Deep-intronic variants in CNGB3 cause achromatopsia by pseudoexon activation.

Authors:  Nicole Weisschuh; Marc Sturm; Britta Baumann; Isabelle Audo; Carmen Ayuso; Beatrice Bocquet; Kari Branham; Brian P Brooks; Jaume Catalá-Mora; Roberto Giorda; John R Heckenlively; Robert B Hufnagel; Samuel G Jacobson; Ulrich Kellner; Sofia Kitsiou-Tzeli; Alexandre Matet; Loreto Martorell Sampol; Isabelle Meunier; Günther Rudolph; Dror Sharon; Katarina Stingl; Berthold Streubel; Balázs Varsányi; Bernd Wissinger; Susanne Kohl
Journal:  Hum Mutat       Date:  2019-09-30       Impact factor: 4.700

10.  Increasing the yield in targeted next-generation sequencing by implicating CNV analysis, non-coding exons and the overall variant load: the example of retinal dystrophies.

Authors:  Tobias Eisenberger; Christine Neuhaus; Arif O Khan; Christian Decker; Markus N Preising; Christoph Friedburg; Anika Bieg; Martin Gliem; Peter Charbel Issa; Frank G Holz; Shahid M Baig; Yorck Hellenbroich; Alberto Galvez; Konrad Platzer; Bernd Wollnik; Nadja Laddach; Saeed Reza Ghaffari; Maryam Rafati; Elke Botzenhart; Sigrid Tinschert; Doris Börger; Axel Bohring; Julia Schreml; Stefani Körtge-Jung; Chayim Schell-Apacik; Khadijah Bakur; Jumana Y Al-Aama; Teresa Neuhann; Peter Herkenrath; Gudrun Nürnberg; Peter Nürnberg; John S Davis; Andreas Gal; Carsten Bergmann; Birgit Lorenz; Hanno J Bolz
Journal:  PLoS One       Date:  2013-11-12       Impact factor: 3.240

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  21 in total

Review 1.  Effects and Prognosis of Cataract Surgery in Patients with Retinitis Pigmentosa.

Authors:  Hailong He; Hao Song; Xiaodie Meng; Kai Cao; Yi-Xin Liu; Jinda Wang; Xiuhua Wan; Zi-Bing Jin
Journal:  Ophthalmol Ther       Date:  2022-09-04

Review 2.  New Editing Tools for Gene Therapy in Inherited Retinal Dystrophies.

Authors:  Juliette Pulman; José-Alain Sahel; Deniz Dalkara
Journal:  CRISPR J       Date:  2022-05-03

3.  Stationary and Progressive Phenotypes Caused by the p.G90D Mutation in Rhodopsin Gene.

Authors:  Nina Kobal; Tjaša Krašovec; Maja Šuštar; Marija Volk; Borut Peterlin; Marko Hawlina; Ana Fakin
Journal:  Int J Mol Sci       Date:  2021-02-21       Impact factor: 5.923

4.  Long-Range PCR-Based NGS Applications to Diagnose Mendelian Retinal Diseases.

Authors:  Jordi Maggi; Samuel Koller; Luzy Bähr; Silke Feil; Fatma Kivrak Pfiffner; James V M Hanson; Alessandro Maspoli; Christina Gerth-Kahlert; Wolfgang Berger
Journal:  Int J Mol Sci       Date:  2021-02-03       Impact factor: 5.923

5.  Fundus flavimaculatus-like in myotonic dystrophy: a case report.

Authors:  Eric Kirkegaard-Biosca; Mònica Berges-Marti; Brahim Azarfane; Esther Cilveti; Laura Distefano; Jose García-Arumí
Journal:  BMC Ophthalmol       Date:  2021-05-29       Impact factor: 2.209

Review 6.  Inherited Retinal Diseases Due to RPE65 Variants: From Genetic Diagnostic Management to Therapy.

Authors:  Manar Aoun; Ilaria Passerini; Pietro Chiurazzi; Marianthi Karali; Irene De Rienzo; Giovanna Sartor; Vittoria Murro; Natalia Filimonova; Marco Seri; Sandro Banfi
Journal:  Int J Mol Sci       Date:  2021-07-05       Impact factor: 5.923

7.  NGS and phenotypic ontology-based approaches increase the diagnostic yield in syndromic retinal diseases.

Authors:  I Perea-Romero; F Blanco-Kelly; I Sanchez-Navarro; I Lorda-Sanchez; S Tahsin-Swafiri; A Avila-Fernandez; I Martin-Merida; M J Trujillo-Tiebas; R Lopez-Rodriguez; M Rodriguez de Alba; I F Iancu; R Romero; M Quinodoz; H Hakonarson; Blanca Garcia-Sandova; P Minguez; M Corton; C Rivolta; C Ayuso
Journal:  Hum Genet       Date:  2021-08-26       Impact factor: 4.132

8.  A new PDE6A missense variant p.Arg544Gln in rod-cone dystrophy.

Authors:  Takaaki Hayashi; Kei Mizobuchi; Shuhei Kameya; Kazutoshi Yoshitake; Takeshi Iwata; Tadashi Nakano
Journal:  Doc Ophthalmol       Date:  2021-02-21       Impact factor: 2.379

9.  Molecular Inversion Probe-Based Sequencing of USH2A Exons and Splice Sites as a Cost-Effective Screening Tool in USH2 and arRP Cases.

Authors:  Janine Reurink; Adrian Dockery; Dominika Oziębło; G Jane Farrar; Monika Ołdak; Jacoline B Ten Brink; Arthur A Bergen; Tuula Rinne; Helger G Yntema; Ronald J E Pennings; L Ingeborgh van den Born; Marco Aben; Jaap Oostrik; Hanka Venselaar; Astrid S Plomp; M Imran Khan; Erwin van Wijk; Frans P M Cremers; Susanne Roosing; Hannie Kremer
Journal:  Int J Mol Sci       Date:  2021-06-15       Impact factor: 5.923

10.  Updating the Genetic Landscape of Inherited Retinal Dystrophies.

Authors:  Belén García Bohórquez; Elena Aller; Ana Rodríguez Muñoz; Teresa Jaijo; Gema García García; José M Millán
Journal:  Front Cell Dev Biol       Date:  2021-07-13
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