Literature DB >> 33452239

A fourth-generation high-dimensional neural network potential with accurate electrostatics including non-local charge transfer.

Tsz Wai Ko1, Jonas A Finkler2, Stefan Goedecker3, Jörg Behler4.   

Abstract

Machine learning potentials have become an important tool for atomistic simulations in many fields, from chemistry via molecular biology to materials science. Most of the established methods, however, rely on local properties and are thus unable to take global changes in the electronic structure into account, which result from long-range charge transfer or different charge states. In this work we overcome this limitation by introducing a fourth-generation high-dimensional neural network potential that combines a charge equilibration scheme employing environment-dependent atomic electronegativities with accurate atomic energies. The method, which is able to correctly describe global charge distributions in arbitrary systems, yields much improved energies and substantially extends the applicability of modern machine learning potentials. This is demonstrated for a series of systems representing typical scenarios in chemistry and materials science that are incorrectly described by current methods, while the fourth-generation neural network potential is in excellent agreement with electronic structure calculations.

Entities:  

Year:  2021        PMID: 33452239      PMCID: PMC7811002          DOI: 10.1038/s41467-020-20427-2

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  34 in total

1.  Generalized Gradient Approximation Made Simple.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  Inducing wetting morphologies and increased reactivities of small Au clusters on doped oxide supports.

Authors:  Nisha Mammen; Shobhana Narasimhan
Journal:  J Chem Phys       Date:  2018-11-07       Impact factor: 3.488

3.  Support vector machine regression (LS-SVM)--an alternative to artificial neural networks (ANNs) for the analysis of quantum chemistry data?

Authors:  Roman M Balabin; Ekaterina I Lomakina
Journal:  Phys Chem Chem Phys       Date:  2011-05-19       Impact factor: 3.676

4.  Surface reconstructions and premelting of the (100) CaF2 surface.

Authors:  Somayeh Faraji; S Alireza Ghasemi; Behnam Parsaeifard; Stefan Goedecker
Journal:  Phys Chem Chem Phys       Date:  2019-07-24       Impact factor: 3.676

Review 5.  First Principles Neural Network Potentials for Reactive Simulations of Large Molecular and Condensed Systems.

Authors:  Jörg Behler
Journal:  Angew Chem Int Ed Engl       Date:  2017-08-18       Impact factor: 15.336

6.  Machine Learning for Molecular Simulation.

Authors:  Frank Noé; Alexandre Tkatchenko; Klaus-Robert Müller; Cecilia Clementi
Journal:  Annu Rev Phys Chem       Date:  2020-02-24       Impact factor: 12.703

7.  PhysNet: A Neural Network for Predicting Energies, Forces, Dipole Moments, and Partial Charges.

Authors:  Oliver T Unke; Markus Meuwly
Journal:  J Chem Theory Comput       Date:  2019-05-14       Impact factor: 6.006

8.  The effect of ionization on the global minima of small and medium sized silicon and magnesium clusters.

Authors:  Sandip De; S Alireza Ghasemi; Alexander Willand; Luigi Genovese; Dilip Kanhere; Stefan Goedecker
Journal:  J Chem Phys       Date:  2011-03-28       Impact factor: 3.488

9.  Bypassing the Kohn-Sham equations with machine learning.

Authors:  Felix Brockherde; Leslie Vogt; Li Li; Mark E Tuckerman; Kieron Burke; Klaus-Robert Müller
Journal:  Nat Commun       Date:  2017-10-11       Impact factor: 14.919

10.  ANI-1: an extensible neural network potential with DFT accuracy at force field computational cost.

Authors:  J S Smith; O Isayev; A E Roitberg
Journal:  Chem Sci       Date:  2017-02-08       Impact factor: 9.825

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  20 in total

1.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

2.  Deep Neural Network Model to Predict the Electrostatic Parameters in the Polarizable Classical Drude Oscillator Force Field.

Authors:  Anmol Kumar; Poonam Pandey; Payal Chatterjee; Alexander D MacKerell
Journal:  J Chem Theory Comput       Date:  2022-02-11       Impact factor: 6.006

Review 3.  Protein Function Analysis through Machine Learning.

Authors:  Chris Avery; John Patterson; Tyler Grear; Theodore Frater; Donald J Jacobs
Journal:  Biomolecules       Date:  2022-09-06

4.  A Hybrid Machine Learning Approach for Structure Stability Prediction in Molecular Co-crystal Screenings.

Authors:  Simon Wengert; Gábor Csányi; Karsten Reuter; Johannes T Margraf
Journal:  J Chem Theory Comput       Date:  2022-06-16       Impact factor: 6.578

5.  BIGDML-Towards accurate quantum machine learning force fields for materials.

Authors:  Huziel E Sauceda; Luis E Gálvez-González; Stefan Chmiela; Lauro Oliver Paz-Borbón; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Nat Commun       Date:  2022-06-29       Impact factor: 17.694

Review 6.  Implicit Solvation Methods for Catalysis at Electrified Interfaces.

Authors:  Stefan Ringe; Nicolas G Hörmann; Harald Oberhofer; Karsten Reuter
Journal:  Chem Rev       Date:  2021-12-20       Impact factor: 72.087

7.  Machine Learning Force Fields.

Authors:  Oliver T Unke; Stefan Chmiela; Huziel E Sauceda; Michael Gastegger; Igor Poltavsky; Kristof T Schütt; Alexandre Tkatchenko; Klaus-Robert Müller
Journal:  Chem Rev       Date:  2021-03-11       Impact factor: 60.622

8.  A fourth-generation high-dimensional neural network potential with accurate electrostatics including non-local charge transfer.

Authors:  Tsz Wai Ko; Jonas A Finkler; Stefan Goedecker; Jörg Behler
Journal:  Nat Commun       Date:  2021-01-15       Impact factor: 14.919

9.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

Review 10.  "Dividing and Conquering" and "Caching" in Molecular Modeling.

Authors:  Xiaoyong Cao; Pu Tian
Journal:  Int J Mol Sci       Date:  2021-05-10       Impact factor: 5.923

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