Literature DB >> 33449144

Integrating lipidomics and genomics: emerging tools to understand cardiovascular diseases.

Rubina Tabassum1, Samuli Ripatti2,3,4.   

Abstract

Cardiovascular diseases (CVDs) are the leading cause of mortality and morbidity worldwide leading to 31% of all global deaths. Early prediction and prevention could greatly reduce the enormous socio-economic burden posed by CVDs. Plasma lipids have been at the center stage of the prediction and prevention strategies for CVDs that have mostly relied on traditional lipids (total cholesterol, total triglycerides, HDL-C and LDL-C). The tremendous advancement in the field of lipidomics in last two decades has facilitated the research efforts to unravel the metabolic dysregulation in CVDs and their genetic determinants, enabling the understanding of pathophysiological mechanisms and identification of predictive biomarkers, beyond traditional lipids. This review presents an overview of the application of lipidomics in epidemiological and genetic studies and their contributions to the current understanding of the field. We review findings of these studies and discuss examples that demonstrates the potential of lipidomics in revealing new biology not captured by traditional lipids and lipoprotein measurements. The promising findings from these studies have raised new opportunities in the fields of personalized and predictive medicine for CVDs. The review further discusses prospects of integrating emerging genomics tools with the high-dimensional lipidome to move forward from the statistical associations towards biological understanding, therapeutic target development and risk prediction. We believe that integrating genomics with lipidome holds a great potential but further advancements in statistical and computational tools are needed to handle the high-dimensional and correlated lipidome.

Entities:  

Keywords:  Biomarkers; Disease risk; Genome-wide association studies; Lipid species; Pathophysiology

Mesh:

Substances:

Year:  2021        PMID: 33449144     DOI: 10.1007/s00018-020-03715-4

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  126 in total

Review 1.  The human plasma lipidome.

Authors:  Oswald Quehenberger; Edward A Dennis
Journal:  N Engl J Med       Date:  2011-11-10       Impact factor: 91.245

2.  RISK FACTORS IN CORONARY HEART DISEASE. AN EVALUATION OF SEVERAL SERUM LIPIDS AS PREDICTORS OF CORONARY HEART DISEASE; THE FRAMINGHAM STUDY.

Authors:  W B KANNEL; T R DAWBER; G D FRIEDMAN; W E GLENNON; P M MCNAMARA
Journal:  Ann Intern Med       Date:  1964-11       Impact factor: 25.391

Review 3.  A comprehensive classification system for lipids.

Authors:  Eoin Fahy; Shankar Subramaniam; H Alex Brown; Christopher K Glass; Alfred H Merrill; Robert C Murphy; Christian R H Raetz; David W Russell; Yousuke Seyama; Walter Shaw; Takao Shimizu; Friedrich Spener; Gerrit van Meer; Michael S VanNieuwenhze; Stephen H White; Joseph L Witztum; Edward A Dennis
Journal:  J Lipid Res       Date:  2005-02-16       Impact factor: 5.922

4.  Risk factors for ischaemic and intracerebral haemorrhagic stroke in 22 countries (the INTERSTROKE study): a case-control study.

Authors:  Martin J O'Donnell; Denis Xavier; Lisheng Liu; Hongye Zhang; Siu Lim Chin; Purnima Rao-Melacini; Sumathy Rangarajan; Shofiqul Islam; Prem Pais; Matthew J McQueen; Charles Mondo; Albertino Damasceno; Patricio Lopez-Jaramillo; Graeme J Hankey; Antonio L Dans; Khalid Yusoff; Thomas Truelsen; Hans-Christoph Diener; Ralph L Sacco; Danuta Ryglewicz; Anna Czlonkowska; Christian Weimar; Xingyu Wang; Salim Yusuf
Journal:  Lancet       Date:  2010-06-17       Impact factor: 79.321

Review 5.  Lipidomics: coming to grips with lipid diversity.

Authors:  Andrej Shevchenko; Kai Simons
Journal:  Nat Rev Mol Cell Biol       Date:  2010-07-07       Impact factor: 94.444

Review 6.  Informatics and computational strategies for the study of lipids.

Authors:  Laxman Yetukuri; Kim Ekroos; Antonio Vidal-Puig; Matej Oresic
Journal:  Mol Biosyst       Date:  2007-12-18

7.  Modifiable risk factors, cardiovascular disease, and mortality in 155 722 individuals from 21 high-income, middle-income, and low-income countries (PURE): a prospective cohort study.

Authors:  Salim Yusuf; Philip Joseph; Sumathy Rangarajan; Shofiqul Islam; Andrew Mente; Perry Hystad; Michael Brauer; Vellappillil Raman Kutty; Rajeev Gupta; Andreas Wielgosz; Khalid F AlHabib; Antonio Dans; Patricio Lopez-Jaramillo; Alvaro Avezum; Fernando Lanas; Aytekin Oguz; Iolanthe M Kruger; Rafael Diaz; Khalid Yusoff; Prem Mony; Jephat Chifamba; Karen Yeates; Roya Kelishadi; Afzalhussein Yusufali; Rasha Khatib; Omar Rahman; Katarzyna Zatonska; Romaina Iqbal; Li Wei; Hu Bo; Annika Rosengren; Manmeet Kaur; Viswanathan Mohan; Scott A Lear; Koon K Teo; Darryl Leong; Martin O'Donnell; Martin McKee; Gilles Dagenais
Journal:  Lancet       Date:  2019-09-03       Impact factor: 79.321

Review 8.  2019 ACC/AHA Guideline on the Primary Prevention of Cardiovascular Disease: A Report of the American College of Cardiology/American Heart Association Task Force on Clinical Practice Guidelines.

Authors:  Donna K Arnett; Roger S Blumenthal; Michelle A Albert; Andrew B Buroker; Zachary D Goldberger; Ellen J Hahn; Cheryl Dennison Himmelfarb; Amit Khera; Donald Lloyd-Jones; J William McEvoy; Erin D Michos; Michael D Miedema; Daniel Muñoz; Sidney C Smith; Salim S Virani; Kim A Williams; Joseph Yeboah; Boback Ziaeian
Journal:  Circulation       Date:  2019-03-17       Impact factor: 29.690

9.  Genetic architecture of human plasma lipidome and its link to cardiovascular disease.

Authors:  Rubina Tabassum; Joel T Rämö; Pietari Ripatti; Jukka T Koskela; Mitja Kurki; Juha Karjalainen; Priit Palta; Shabbeer Hassan; Javier Nunez-Fontarnau; Tuomo T J Kiiskinen; Sanni Söderlund; Niina Matikainen; Mathias J Gerl; Michal A Surma; Christian Klose; Nathan O Stitziel; Hannele Laivuori; Aki S Havulinna; Susan K Service; Veikko Salomaa; Matti Pirinen; Matti Jauhiainen; Mark J Daly; Nelson B Freimer; Aarno Palotie; Marja-Riitta Taskinen; Kai Simons; Samuli Ripatti
Journal:  Nat Commun       Date:  2019-09-24       Impact factor: 14.919

Review 10.  Lipidomics unveils the complexity of the lipidome in metabolic diseases.

Authors:  Todd A Lydic; Young-Hwa Goo
Journal:  Clin Transl Med       Date:  2018-01-26
View more
  7 in total

Review 1.  Dynamic Progress in Technological Advances to Study Lipids in Aging: Challenges and Future Directions.

Authors:  Fangyuan Gao; Emily Tom; Dorota Skowronska-Krawczyk
Journal:  Front Aging       Date:  2022-03-10

2.  Lipid analysis by ion mobility spectrometry combined with mass spectrometry: A brief update with a perspective on applications in the clinical laboratory.

Authors:  Joshua A Dubland
Journal:  J Mass Spectrom Adv Clin Lab       Date:  2021-12-13

3.  Lipidomic risk scores are independent of polygenic risk scores and can predict incidence of diabetes and cardiovascular disease in a large population cohort.

Authors:  Chris Lauber; Mathias J Gerl; Christian Klose; Filip Ottosson; Olle Melander; Kai Simons
Journal:  PLoS Biol       Date:  2022-03-03       Impact factor: 9.593

4.  Comprehensive Metabolic Profiling of Inflammation Indicated Key Roles of Glycerophospholipid and Arginine Metabolism in Coronary Artery Disease.

Authors:  Qian Zhu; Yonglin Wu; Jinxia Mai; Gongjie Guo; Jinxiu Meng; Xianhong Fang; Xiaoping Chen; Chen Liu; Shilong Zhong
Journal:  Front Immunol       Date:  2022-03-08       Impact factor: 7.561

Review 5.  Lipidomics-Assisted GWAS (lGWAS) Approach for Improving High-Temperature Stress Tolerance of Crops.

Authors:  Velumani Pranneshraj; Manjeet Kaur Sangha; Ivica Djalovic; Jegor Miladinovic; Maduraimuthu Djanaguiraman
Journal:  Int J Mol Sci       Date:  2022-08-20       Impact factor: 6.208

6.  Genetic Architecture of Untargeted Lipidomics in Cardiometabolic-Disease Patients Combines Strong Polygenic Control and Pleiotropy.

Authors:  Francois Brial; Lyamine Hedjazi; Kazuhiro Sonomura; Cynthia Al Hageh; Pierre Zalloua; Fumihiko Matsuda; Dominique Gauguier
Journal:  Metabolites       Date:  2022-06-27

Review 7.  The foundations and development of lipidomics.

Authors:  Xianlin Han; Richard W Gross
Journal:  J Lipid Res       Date:  2021-12-22       Impact factor: 5.922

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.