Literature DB >> 33444382

Efficient multiplexed genome engineering with a polycistronic tRNA and CRISPR guide-RNA reveals an important role of detonator in reproduction of Drosophila melanogaster.

Cristin Chon1, Grace Chon1, Yurika Matsui1, Huiqing Zeng1, Zhi-Chun Lai1, Aimin Liu1.   

Abstract

Genome association studies in human and genetic studies in mouse implicated members of the transmembrane protein 132 (TMEM132) family in multiple conditions including panic disorder, hearing loss, limb and kidney malformation. However, the presence of five TMEM132 paralogs in mammalian genomes makes it extremely challenging to reveal the full requirement for these proteins in vivo. In contrast, there is only one TMEM132 homolog, detonator (dtn), in the genome of fruit fly Drosophila melanogaster, enabling straightforward research into its in vivo function. In the current study, we generate multiple loss-of-function dtn mutant fly strains through a polycistronic tRNA-gRNA approach, and show that most embryos lacking both maternal and paternal dtn fail to hatch into larvae, indicating an essential role of dtn in Drosophila reproduction.

Entities:  

Year:  2021        PMID: 33444382      PMCID: PMC7808601          DOI: 10.1371/journal.pone.0245454

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  26 in total

1.  A mouse for all reasons.

Authors:  Francis S Collins; Janet Rossant; Wolfgang Wurst
Journal:  Cell       Date:  2007-01-12       Impact factor: 41.582

2.  Differential microarray analysis of Drosophila mushroom body transcripts using chemical ablation.

Authors:  Masatomo Kobayashi; Lydia Michaut; Ayako Ino; Ken Honjo; Taiki Nakajima; Yasushi Maruyama; Hiroaki Mochizuki; Mai Ando; Indrayani Ghangrekar; Kuniaki Takahashi; Kaoru Saigo; Ryu Ueda; Walter J Gehring; Katsuo Furukubo-Tokunaga
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-13       Impact factor: 11.205

3.  Highly efficient genome modifications mediated by CRISPR/Cas9 in Drosophila.

Authors:  Zhongsheng Yu; Mengda Ren; Zhanxiang Wang; Bo Zhang; Yikang S Rong; Renjie Jiao; Guanjun Gao
Journal:  Genetics       Date:  2013-07-05       Impact factor: 4.562

4.  TMEM132D, a new candidate for anxiety phenotypes: evidence from human and mouse studies.

Authors:  A Erhardt; L Czibere; D Roeske; S Lucae; P G Unschuld; S Ripke; M Specht; M A Kohli; S Kloiber; M Ising; A Heck; H Pfister; P Zimmermann; R Lieb; B Pütz; M Uhr; P Weber; J M Deussing; M Gonik; M Bunck; M S Kebler; E Frank; C Hohoff; K Domschke; P Krakowitzky; W Maier; B Bandelow; C Jacob; J Deckert; S Schreiber; J Strohmaier; M Nöthen; S Cichon; M Rietschel; T Bettecken; M E Keck; R Landgraf; B Müller-Myhsok; F Holsboer; E B Binder
Journal:  Mol Psychiatry       Date:  2010-04-06       Impact factor: 15.992

5.  Polycistronic tRNA and CRISPR guide-RNA enables highly efficient multiplexed genome engineering in human cells.

Authors:  Fengping Dong; Kabin Xie; Yueying Chen; Yinong Yang; Yingwei Mao
Journal:  Biochem Biophys Res Commun       Date:  2016-11-25       Impact factor: 3.575

6.  Polymorphism of CRISPR shows separated natural groupings of Shigella subtypes and evidence of horizontal transfer of CRISPR.

Authors:  Chaojie Yang; Peng Li; Wenli Su; Hao Li; Hongbo Liu; Guang Yang; Jing Xie; Shengjie Yi; Jian Wang; Xianyan Cui; Zhihao Wu; Ligui Wang; Rongzhang Hao; Leili Jia; Shaofu Qiu; Hongbin Song
Journal:  RNA Biol       Date:  2015-09-01       Impact factor: 4.652

7.  Lessons learned from whole exome sequencing in multiplex families affected by a complex genetic disorder, intracranial aneurysm.

Authors:  Janice L Farlow; Hai Lin; Laura Sauerbeck; Dongbing Lai; Daniel L Koller; Elizabeth Pugh; Kurt Hetrick; Hua Ling; Rachel Kleinloog; Pieter van der Vlies; Patrick Deelen; Morris A Swertz; Bon H Verweij; Luca Regli; Gabriel J E Rinkel; Ynte M Ruigrok; Kimberly Doheny; Yunlong Liu; Joseph Broderick; Tatiana Foroud
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

8.  Polymorphisms in the TMEM132D region are associated with panic disorder in HLA-DRB1*13:02-negative individuals of a Japanese population.

Authors:  Mihoko Shimada-Sugimoto; Takeshi Otowa; Taku Miyagawa; Seik-Soon Khor; Yosuke Omae; Licht Toyo-Oka; Nagisa Sugaya; Yoshiya Kawamura; Tadashi Umekage; Akinori Miyashita; Ryozo Kuwano; Hisanobu Kaiya; Kiyoto Kasai; Hisashi Tanii; Yuji Okazaki; Katsushi Tokunaga; Tsukasa Sasaki
Journal:  Hum Genome Var       Date:  2016-02-25

Review 9.  Advances in Engineering the Fly Genome with the CRISPR-Cas System.

Authors:  Ethan Bier; Melissa M Harrison; Kate M O'Connor-Giles; Jill Wildonger
Journal:  Genetics       Date:  2018-01       Impact factor: 4.562

10.  High-throughput discovery of novel developmental phenotypes.

Authors:  Mary E Dickinson; Ann M Flenniken; Xiao Ji; Lydia Teboul; Michael D Wong; Jacqueline K White; Terrence F Meehan; Wolfgang J Weninger; Henrik Westerberg; Hibret Adissu; Candice N Baker; Lynette Bower; James M Brown; L Brianna Caddle; Francesco Chiani; Dave Clary; James Cleak; Mark J Daly; James M Denegre; Brendan Doe; Mary E Dolan; Sarah M Edie; Helmut Fuchs; Valerie Gailus-Durner; Antonella Galli; Alessia Gambadoro; Juan Gallegos; Shiying Guo; Neil R Horner; Chih-Wei Hsu; Sara J Johnson; Sowmya Kalaga; Lance C Keith; Louise Lanoue; Thomas N Lawson; Monkol Lek; Manuel Mark; Susan Marschall; Jeremy Mason; Melissa L McElwee; Susan Newbigging; Lauryl M J Nutter; Kevin A Peterson; Ramiro Ramirez-Solis; Douglas J Rowland; Edward Ryder; Kaitlin E Samocha; John R Seavitt; Mohammed Selloum; Zsombor Szoke-Kovacs; Masaru Tamura; Amanda G Trainor; Ilinca Tudose; Shigeharu Wakana; Jonathan Warren; Olivia Wendling; David B West; Leeyean Wong; Atsushi Yoshiki; Daniel G MacArthur; Glauco P Tocchini-Valentini; Xiang Gao; Paul Flicek; Allan Bradley; William C Skarnes; Monica J Justice; Helen E Parkinson; Mark Moore; Sara Wells; Robert E Braun; Karen L Svenson; Martin Hrabe de Angelis; Yann Herault; Tim Mohun; Ann-Marie Mallon; R Mark Henkelman; Steve D M Brown; David J Adams; K C Kent Lloyd; Colin McKerlie; Arthur L Beaudet; Maja Bućan; Stephen A Murray
Journal:  Nature       Date:  2016-09-14       Impact factor: 49.962

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  3 in total

Review 1.  Roles, molecular mechanisms, and signaling pathways of TMEMs in neurological diseases.

Authors:  Qinghong Chen; Junlin Fang; Hui Shen; Liping Chen; Mengying Shi; Xianbao Huang; Zhiwei Miao; Yating Gong
Journal:  Am J Transl Res       Date:  2021-12-15       Impact factor: 4.060

Review 2.  Synaptic dysfunction connects autism spectrum disorder and sleep disturbances: A perspective from studies in model organisms.

Authors:  Fusun Doldur-Balli; Toshihiro Imamura; Olivia J Veatch; Naihua N Gong; Diane C Lim; Michael P Hart; Ted Abel; Matthew S Kayser; Edward S Brodkin; Allan I Pack
Journal:  Sleep Med Rev       Date:  2022-01-25       Impact factor: 11.401

3.  ABE8e with Polycistronic tRNA-gRNA Expression Cassette Sig-Nificantly Improves Adenine Base Editing Efficiency in Nicotiana benthamiana.

Authors:  Zupeng Wang; Xiaoying Liu; Xiaodong Xie; Lei Deng; Hao Zheng; Hui Pan; Dawei Li; Li Li; Caihong Zhong
Journal:  Int J Mol Sci       Date:  2021-05-26       Impact factor: 5.923

  3 in total

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