Literature DB >> 33443081

Systems Neuroscience of Natural Behaviors in Rodents.

Emily Jane Dennis1, Ahmed El Hady2, Angie Michaiel3, Ann Clemens4, Dougal R Gowan Tervo5, Jakob Voigts6, Sandeep Robert Datta7.   

Abstract

Animals evolved in complex environments, producing a wide range of behaviors, including navigation, foraging, prey capture, and conspecific interactions, which vary over timescales ranging from milliseconds to days. Historically, these behaviors have been the focus of study for ecology and ethology, while systems neuroscience has largely focused on short timescale behaviors that can be repeated thousands of times and occur in highly artificial environments. Thanks to recent advances in machine learning, miniaturization, and computation, it is newly possible to study freely moving animals in more natural conditions while applying systems techniques: performing temporally specific perturbations, modeling behavioral strategies, and recording from large numbers of neurons while animals are freely moving. The authors of this review are a group of scientists with deep appreciation for the common aims of systems neuroscience, ecology, and ethology. We believe it is an extremely exciting time to be a neuroscientist, as we have an opportunity to grow as a field, to embrace interdisciplinary, open, collaborative research to provide new insights and allow researchers to link knowledge across disciplines, species, and scales. Here we discuss the origins of ethology, ecology, and systems neuroscience in the context of our own work and highlight how combining approaches across these fields has provided fresh insights into our research. We hope this review facilitates some of these interactions and alliances and helps us all do even better science, together.
Copyright © 2021 the authors.

Keywords:  behavioral ecology; ethology; natural behavior; rodents; systems neuroscience

Year:  2020        PMID: 33443081      PMCID: PMC7880287          DOI: 10.1523/JNEUROSCI.1877-20.2020

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  101 in total

1.  Mapping Sub-Second Structure in Mouse Behavior.

Authors:  Alexander B Wiltschko; Matthew J Johnson; Giuliano Iurilli; Ralph E Peterson; Jesse M Katon; Stan L Pashkovski; Victoria E Abraira; Ryan P Adams; Sandeep Robert Datta
Journal:  Neuron       Date:  2015-12-16       Impact factor: 17.173

2.  A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice.

Authors:  Ana S Machado; Dana M Darmohray; João Fayad; Hugo G Marques; Megan R Carey
Journal:  Elife       Date:  2015-10-03       Impact factor: 8.140

3.  Imaging large-scale neural activity with cellular resolution in awake, mobile mice.

Authors:  Daniel A Dombeck; Anton N Khabbaz; Forrest Collman; Thomas L Adelman; David W Tank
Journal:  Neuron       Date:  2007-10-04       Impact factor: 17.173

4.  Fast animal pose estimation using deep neural networks.

Authors:  Talmo D Pereira; Diego E Aldarondo; Lindsay Willmore; Mikhail Kislin; Samuel S-H Wang; Mala Murthy; Joshua W Shaevitz
Journal:  Nat Methods       Date:  2018-12-20       Impact factor: 28.547

5.  Dynamics of gaze control during prey capture in freely moving mice.

Authors:  Angie M Michaiel; Elliott Tt Abe; Cristopher M Niell
Journal:  Elife       Date:  2020-07-24       Impact factor: 8.140

6.  Foraging as an evidence accumulation process.

Authors:  Jacob D Davidson; Ahmed El Hady
Journal:  PLoS Comput Biol       Date:  2019-07-24       Impact factor: 4.475

7.  A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.

Authors:  Zhihao Zheng; J Scott Lauritzen; Eric Perlman; Camenzind G Robinson; Matthew Nichols; Daniel Milkie; Omar Torrens; John Price; Corey B Fisher; Nadiya Sharifi; Steven A Calle-Schuler; Lucia Kmecova; Iqbal J Ali; Bill Karsh; Eric T Trautman; John A Bogovic; Philipp Hanslovsky; Gregory S X E Jefferis; Michael Kazhdan; Khaled Khairy; Stephan Saalfeld; Richard D Fetter; Davi D Bock
Journal:  Cell       Date:  2018-07-19       Impact factor: 41.582

8.  Activation of serotonin neurons promotes active persistence in a probabilistic foraging task.

Authors:  Eran Lottem; Dhruba Banerjee; Pietro Vertechi; Dario Sarra; Matthijs Oude Lohuis; Zachary F Mainen
Journal:  Nat Commun       Date:  2018-03-08       Impact factor: 14.919

9.  Two Distinct Types of Eye-Head Coupling in Freely Moving Mice.

Authors:  Arne F Meyer; John O'Keefe; Jasper Poort
Journal:  Curr Biol       Date:  2020-05-14       Impact factor: 10.834

10.  Social interactions drive efficient foraging and income equality in groups of fish.

Authors:  Roy Harpaz; Elad Schneidman
Journal:  Elife       Date:  2020-08-25       Impact factor: 8.140

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  3 in total

Review 1.  Mesoaccumbal Dopamine Heterogeneity: What Do Dopamine Firing and Release Have to Do with It?

Authors:  Johannes W de Jong; Kurt M Fraser; Stephan Lammel
Journal:  Annu Rev Neurosci       Date:  2022-02-28       Impact factor: 15.553

2.  An Easily Compatible Eye-tracking System for Freely-moving Small Animals.

Authors:  Kang Huang; Qin Yang; Yaning Han; Yulin Zhang; Zhiyi Wang; Liping Wang; Pengfei Wei
Journal:  Neurosci Bull       Date:  2022-03-24       Impact factor: 5.271

3.  Refocusing neuroscience: moving away from mental categories and towards complex behaviours.

Authors:  Luiz Pessoa; Loreta Medina; Ester Desfilis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-12-27       Impact factor: 6.237

  3 in total

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