Literature DB >> 33436869

Development and validation of a multiplex 19 X-chromosomal short tandem repeats typing system for forensic purposes.

Juan Jia1, Xu Liu2,3, Qingwei Fan1, Chen Fang2,3, Mengchun Wang1, Jiarong Zhang1, Wanting Li1, Linyu Shi1, Xiaomeng Zhang1, Chuguang Chen4, Zailiang Yu4, Chen Li4, Keming Yun5, Jiangwei Yan6.   

Abstract

X-chromosome short tandem repeat (X-STR) markers are a powerful complementary system used for paternity and forensic casework. This study presents the development and validation of a new highly efficient multiplex-fluorescent-labeled 19 X-STR typing system, including DXS10079, DXS101, DXS10135, DXS10162, DXS6795, DXS6800, DXS6803, DXS6807, DXS6809, DXS6810, DXS7133, DXS7423, DXS981, DXS9902, DXS9907, GATA165B12, GATA172D05, GATA31E08 and HPRTB along with sex-typing locus, amelogenin. The system was validated according to guidelines issued by the Scientific Working Group on DNA Analysis Methods. Allele frequency and forensic parameters were investigated from 1085 (494 males and 591 females) unrelated Beijing Han individuals, the combined power of discrimination by the 19 X-STR loci in females and males, as well as the combined mean exclusion chance in trios and duos, were 0.999999999999999995, 0.99999999995, 0.9999999995, and 0.9999996, respectively. The results demonstrate that this multiplex system is robust and reliable, and considered to be a powerful tool for forensic application.

Entities:  

Year:  2021        PMID: 33436869      PMCID: PMC7803774          DOI: 10.1038/s41598-020-80414-x

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  25 in total

Review 1.  X-chromosomal markers: past, present and future.

Authors:  Reinhard Szibor
Journal:  Forensic Sci Int Genet       Date:  2007-04-27       Impact factor: 4.882

2.  New reference allelic ladders to improve allelic designation in a multiplex STR system.

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Journal:  Int J Legal Med       Date:  1998       Impact factor: 2.686

3.  genepop'007: a complete re-implementation of the genepop software for Windows and Linux.

Authors:  François Rousset
Journal:  Mol Ecol Resour       Date:  2008-01       Impact factor: 7.090

4.  Sequence analysis and characterization of stutter products at the tetranucleotide repeat locus vWA.

Authors:  P S Walsh; N J Fildes; R Reynolds
Journal:  Nucleic Acids Res       Date:  1996-07-15       Impact factor: 16.971

5.  Substrate nucleotide-determined non-templated addition of adenine by Taq DNA polymerase: implications for PCR-based genotyping and cloning.

Authors:  V L Magnuson; D S Ally; S J Nylund; Z E Karanjawala; J B Rayman; J I Knapp; A L Lowe; S Ghosh; F S Collins
Journal:  Biotechniques       Date:  1996-10       Impact factor: 1.993

6.  Multiplex PCR for 18 X-chromosomal STRs in Japanese population.

Authors:  Yasutaka Nakamura; Michinaga Samejima; Keiji Tamaki; Kiyoshi Minaguchi
Journal:  Leg Med (Tokyo)       Date:  2012-12-06       Impact factor: 1.376

7.  Population data of 12 X-chromosomal STR loci in Chinese Han samples from Hebei Province.

Authors:  Jie Xu; Liang Lei; Xiao-jing Zhang; Li-hong Fu; Feng Yu; Chun-ling Ma; Shu-jin Li; Bin Cong
Journal:  Forensic Sci Int Genet       Date:  2012-12-21       Impact factor: 4.882

8.  Development of a 20-locus fluorescent multiplex system as a valuable tool for national DNA database.

Authors:  Xianhua Jiang; Fei Guo; Fei Jia; Ping Jin; Zhu Sun
Journal:  Forensic Sci Int Genet       Date:  2012-12-21       Impact factor: 4.882

9.  Analysis of the 19 Y-STR and 16 X-STR loci system in the Han population of Shandong province, China.

Authors:  H M Gao; C Wang; S Y Han; S H Sun; D J Xiao; Y S Wang; C T Li; M X Zhang
Journal:  Genet Mol Res       Date:  2017-03-30

Review 10.  Slipped-strand mispairing: a major mechanism for DNA sequence evolution.

Authors:  G Levinson; G A Gutman
Journal:  Mol Biol Evol       Date:  1987-05       Impact factor: 16.240

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  4 in total

1.  Genetic diversity analysis of forty-three insertion/deletion loci for forensic individual identification in Han Chinese from Beijing based on a novel panel.

Authors:  Congying Zhao; Jinlong Yang; Hui Xu; Shuyan Mei; Yating Fang; Qiong Lan; Yajun Deng; Bofeng Zhu
Journal:  J Zhejiang Univ Sci B       Date:  2022-03-15       Impact factor: 3.066

2.  A decade of molecular preimplantation genetic diagnosis of 350 blastomeres for beta-thalassemia combined with HLA typing, aneuploidy screening and sex selection in Iran.

Authors:  Marzieh Mojbafan; Sirous Zeinali; Yeganeh Keshvar; Solmaz Sabeghi; Zohreh Sharifi; Kiyana Sadat Fatemi; Panti Fouladi; Shahrzad Younesi Khah; Faezeh Rahiminejad; Atefeh Joudaki; Masoume Amini; Hamideh Bagherian; Marefat Ghaffari Novin; Mansoureh Movahedin
Journal:  BMC Pregnancy Childbirth       Date:  2022-04-15       Impact factor: 3.007

3.  Developmental Validation of a Rapidly Mutating Y-STR Panel Labeled by Six Fluoresceins for Forensic Research.

Authors:  Xiaoye Jin; Hongling Zhang; Zheng Ren; Qiyan Wang; Yubo Liu; Jingyan Ji; Han Zhang; Meiqing Yang; Yongsong Zhou; Jiang Huang
Journal:  Front Genet       Date:  2022-03-03       Impact factor: 4.599

Review 4.  Forensic Applications of Markers Present on the X Chromosome.

Authors:  Fernanda M Garcia; Bárbara G O Bessa; Eldamária V W Dos Santos; Julia D P Pereira; Lyvia N R Alves; Lucas A Vianna; Matheus C Casotti; Raquel S R Trabach; Victor S Stange; Débora D Meira; Iuri D Louro
Journal:  Genes (Basel)       Date:  2022-09-07       Impact factor: 4.141

  4 in total

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