Literature DB >> 33436162

Current insights into the genetics of food allergy.

Kanika Kanchan1, Selene Clay2, Haritz Irizar3, Supinda Bunyavanich4, Rasika A Mathias5.   

Abstract

Food allergy (FA), a growing public health burden in the United States, and familial aggregation studies support strong roles for both genes and environment in FA risk. Deepening our understanding of the molecular and cellular mechanisms driving FAs is paramount to improving its prevention, diagnosis, and clinical management. In this review, we document lessons learned from the genetics of FA that have aided our understanding of these mechanisms. Although current genetic association studies suffer from low power, heterogeneity in definition of FA, and difficulty in our ability to truly disentangle FA from food sensitization (FS) and general atopy genetics, they reveal a set of genetic loci, genes, and variants that continue to implicate the importance of barrier and immune function genes across the atopic march, and FA in particular. The largest reported effects on FA are from MALT1 (odds ratio, 10.99), FLG (average odds ratio, ∼2.9), and HLA (average odds ratio, ∼2.03). The biggest challenge in the field of FA genetics is to elucidate the specific mechanism of action on FA risk and pathogenesis for these loci, and integrative approaches including genetics/genomics with transcriptomics, proteomics, and metabolomics will be critical next steps to translating these genetic insights into practice.
Copyright © 2020 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Dual Allergen hypothesis; FLG; Food allergy; HLA; atopic march; barrier genes; genetics; genomics; immune genes; peanut allergy

Mesh:

Substances:

Year:  2021        PMID: 33436162      PMCID: PMC8261836          DOI: 10.1016/j.jaci.2020.10.039

Source DB:  PubMed          Journal:  J Allergy Clin Immunol        ISSN: 0091-6749            Impact factor:   10.793


  115 in total

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Journal:  Am J Respir Crit Care Med       Date:  2001-03       Impact factor: 21.405

Review 2.  CARMA1, BCL-10 and MALT1 in lymphocyte development and activation.

Authors:  Margot Thome
Journal:  Nat Rev Immunol       Date:  2004-05       Impact factor: 53.106

3.  SPINK5 polymorphism is associated with disease severity and food allergy in children with atopic dermatitis.

Authors:  Takashi Kusunoki; Ikuo Okafuji; Takakazu Yoshioka; Megumu Saito; Ryuta Nishikomori; Toshio Heike; Manabu Sugai; Akira Shimizu; Tatsutoshi Nakahata
Journal:  J Allergy Clin Immunol       Date:  2005-03       Impact factor: 10.793

Review 4.  Induction of Th1 and Th2 CD4+ T cell responses: the alternative approaches.

Authors:  S L Constant; K Bottomly
Journal:  Annu Rev Immunol       Date:  1997       Impact factor: 28.527

5.  Shared and distinct genetic risk factors for childhood-onset and adult-onset asthma: genome-wide and transcriptome-wide studies.

Authors:  Milton Pividori; Nathan Schoettler; Dan L Nicolae; Carole Ober; Hae Kyung Im
Journal:  Lancet Respir Med       Date:  2019-04-27       Impact factor: 30.700

6.  Genetic variation at the Th2 immune gene IL13 is associated with IgE-mediated paediatric food allergy.

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Journal:  Clin Exp Allergy       Date:  2017-05-21       Impact factor: 5.018

7.  Peanut allergy in relation to heredity, maternal diet, and other atopic diseases: results of a questionnaire survey, skin prick testing, and food challenges.

Authors:  J O Hourihane; T P Dean; J O Warner
Journal:  BMJ       Date:  1996-08-31

8.  A genome-wide association study of atopic dermatitis identifies loci with overlapping effects on asthma and psoriasis.

Authors:  Stephan Weidinger; Saffron A G Willis-Owen; Yoichiro Kamatani; Hansjörg Baurecht; Nilesh Morar; Liming Liang; Pauline Edser; Teresa Street; Elke Rodriguez; Grainne M O'Regan; Paula Beattie; Regina Fölster-Holst; Andre Franke; Natalija Novak; Caoimhe M Fahy; Mårten C G Winge; Michael Kabesch; Thomas Illig; Simon Heath; Cilla Söderhäll; Erik Melén; Göran Pershagen; Juha Kere; Maria Bradley; Agne Lieden; Magnus Nordenskjold; John I Harper; W H Irwin McLean; Sara J Brown; William O C Cookson; G Mark Lathrop; Alan D Irvine; Miriam F Moffatt
Journal:  Hum Mol Genet       Date:  2013-07-25       Impact factor: 6.150

9.  Multi-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis.

Authors:  Lavinia Paternoster; Marie Standl; Johannes Waage; Hansjörg Baurecht; Melanie Hotze; David P Strachan; John A Curtin; Klaus Bønnelykke; Chao Tian; Atsushi Takahashi; Jorge Esparza-Gordillo; Alexessander Couto Alves; Jacob P Thyssen; Herman T den Dekker; Manuel A Ferreira; Elisabeth Altmaier; Patrick Ma Sleiman; Feng Li Xiao; Juan R Gonzalez; Ingo Marenholz; Birgit Kalb; Maria Pino Yanes; Cheng-Jian Xu; Lisbeth Carstensen; Maria M Groen-Blokhuis; Cristina Venturini; Craig E Pennell; Sheila J Barton; Albert M Levin; Ivan Curjuric; Mariona Bustamante; Eskil Kreiner-Møller; Gabrielle A Lockett; Jonas Bacelis; Supinda Bunyavanich; Rachel A Myers; Anja Matanovic; Ashish Kumar; Joyce Y Tung; Tomomitsu Hirota; Michiaki Kubo; Wendy L McArdle; A J Henderson; John P Kemp; Jie Zheng; George Davey Smith; Franz Rüschendorf; Anja Bauerfeind; Min Ae Lee-Kirsch; Andreas Arnold; Georg Homuth; Carsten O Schmidt; Elisabeth Mangold; Sven Cichon; Thomas Keil; Elke Rodríguez; Annette Peters; Andre Franke; Wolfgang Lieb; Natalija Novak; Regina Fölster-Holst; Momoko Horikoshi; Juha Pekkanen; Sylvain Sebert; Lise L Husemoen; Niels Grarup; Johan C de Jongste; Fernando Rivadeneira; Albert Hofman; Vincent Wv Jaddoe; Suzanne Gma Pasmans; Niels J Elbert; André G Uitterlinden; Guy B Marks; Philip J Thompson; Melanie C Matheson; Colin F Robertson; Janina S Ried; Jin Li; Xian Bo Zuo; Xiao Dong Zheng; Xian Yong Yin; Liang Dan Sun; Maeve A McAleer; Grainne M O'Regan; Caoimhe Mr Fahy; Linda E Campbell; Milan Macek; Michael Kurek; Donglei Hu; Celeste Eng; Dirkje S Postma; Bjarke Feenstra; Frank Geller; Jouke Jan Hottenga; Christel M Middeldorp; Pirro Hysi; Veronique Bataille; Tim Spector; Carla Mt Tiesler; Elisabeth Thiering; Badri Pahukasahasram; James J Yang; Medea Imboden; Scott Huntsman; Natàlia Vilor-Tejedor; Caroline L Relton; Ronny Myhre; Wenche Nystad; Adnan Custovic; Scott T Weiss; Deborah A Meyers; Cilla Söderhäll; Erik Melén; Carole Ober; Benjamin A Raby; Angela Simpson; Bo Jacobsson; John W Holloway; Hans Bisgaard; Jordi Sunyer; Nicole M Probst Hensch; L Keoki Williams; Keith M Godfrey; Carol A Wang; Dorret I Boomsma; Mads Melbye; Gerard H Koppelman; Deborah Jarvis; Wh Irwin McLean; Alan D Irvine; Xue Jun Zhang; Hakon Hakonarson; Christian Gieger; Esteban G Burchard; Nicholas G Martin; Liesbeth Duijts; Allan Linneberg; Marjo-Riitta Jarvelin; Markus M Noethen; Susanne Lau; Norbert Hübner; Young-Ae Lee; Mayumi Tamari; David A Hinds; Daniel Glass; Sara J Brown; Joachim Heinrich; David M Evans; Stephan Weidinger
Journal:  Nat Genet       Date:  2015-10-19       Impact factor: 38.330

10.  Interleukin 10 (IL10) and transforming growth factor β1 (TGFβ1) gene polymorphisms in persistent IgE-mediated cow's milk allergy.

Authors:  Cristina Miuki Abe Jacob; Antonio Carlos Pastorino; Thelma Suely Okay; Ana Paula B M Castro; Andrea Keiko F Gushken; Letícia Aki Watanabe; Vanessa C Z Frucchi; Léa Campos de Oliveira
Journal:  Clinics (Sao Paulo)       Date:  2013-07       Impact factor: 2.365

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  6 in total

1.  Structural insights into the amino acid usage variations in the profilin gene family.

Authors:  Bhupender Singh; Vijayalakshmi Ahanathapillai; Neeta Raj Sharma; Sadaf Jan; Ayan Roy; Atul Kumar Upadhyay
Journal:  Amino Acids       Date:  2022-02-22       Impact factor: 3.520

2.  Prenatal and perinatal risk factors of food allergy in Taiwanese young children.

Authors:  Lin Ching-Wei; Tsai Yi-Fen; Su Yu-Tsun; Yu Hong-Ren; Li Hsing-Jung; Hung Chih-Hsing; Liu Li-Fan; Tsai Hui-Ju; Wang Jiu-Yao
Journal:  World Allergy Organ J       Date:  2022-06-24       Impact factor: 5.516

3.  Early peanut introduction wins over the HLA-DQA1*01:02 allele in the interplay between environment and genetics.

Authors:  Monali Manohar; Kari Christine Nadeau; Maya Kasowski
Journal:  J Clin Invest       Date:  2022-01-04       Impact factor: 14.808

4.  HLA alleles and sustained peanut consumption promote IgG4 responses in subjects protected from peanut allergy.

Authors:  Kanika Kanchan; Stepan Grinek; Henry T Bahnson; Ingo Ruczinski; Gautam Shankar; David Larson; George Du Toit; Kathleen C Barnes; Hugh A Sampson; Mayte Suarez-Farinas; Gideon Lack; Gerald T Nepom; Karen Cerosaletti; Rasika A Mathias
Journal:  J Clin Invest       Date:  2022-01-04       Impact factor: 14.808

5.  Enhanced expression of endogenous retroviruses and of TRIM28 and SETDB1 in children with food allergy.

Authors:  Pier-Angelo Tovo; Giovanna Monti; Valentina Daprà; Paola Montanari; Cristina Calvi; Carla Alliaudi; Allegra Sardo; Ilaria Galliano; Massimiliano Bergallo
Journal:  Clin Transl Allergy       Date:  2022-03       Impact factor: 5.871

6.  Polygenic prediction of atopic dermatitis improves with atopic training and filaggrin factors.

Authors:  Christopher H Arehart; Michelle Daya; Monica Campbell; Meher Preethi Boorgula; Nicholas Rafaels; Sameer Chavan; Gloria David; Jon Hanifin; Mark K Slifka; Richard L Gallo; Tissa Hata; Lynda C Schneider; Amy S Paller; Peck Y Ong; Jonathan M Spergel; Emma Guttman-Yassky; Donald Y M Leung; Lisa A Beck; Christopher R Gignoux; Rasika A Mathias; Kathleen C Barnes
Journal:  J Allergy Clin Immunol       Date:  2021-06-07       Impact factor: 10.793

  6 in total

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