Literature DB >> 33432174

Automated screening of COVID-19 preprints: can we help authors to improve transparency and reproducibility?

Tracey Weissgerber1,2, Nico Riedel3, Halil Kilicoglu4, Cyril Labbé5, Peter Eckmann6,7, Gerben Ter Riet8,9, Jennifer Byrne10,11, Guillaume Cabanac12, Amanda Capes-Davis13, Bertrand Favier14, Shyam Saladi15, Peter Grabitz3,16, Alexandra Bannach-Brown3, Robert Schulz3,16, Sarah McCann3,16, Rene Bernard17, Anita Bandrowski6,7.   

Abstract

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Year:  2021        PMID： 33432174      PMCID： PMC8177099          DOI： 10.1038/s41591-020-01203-7

Source DB:  PubMed          Journal:  Nat Med        ISSN： 1078-8956            Impact factor:   53.440


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  5 in total

1.  Will the pandemic permanently alter scientific publishing?

Authors:  Ewen Callaway
Journal:  Nature       Date:  2020-06       Impact factor: 49.962

Review 2.  Reveal, Don't Conceal: Transforming Data Visualization to Improve Transparency.

Authors:  Tracey L Weissgerber; Stacey J Winham; Ethan P Heinzen; Jelena S Milin-Lazovic; Oscar Garcia-Valencia; Zoran Bukumiric; Marko D Savic; Vesna D Garovic; Natasa M Milic
Journal:  Circulation       Date:  2019-10-28       Impact factor: 29.690

3.  Semi-automated fact-checking of nucleotide sequence reagents in biomedical research publications: The Seek & Blastn tool.

Authors:  Cyril Labbé; Natalie Grima; Thierry Gautier; Bertrand Favier; Jennifer A Byrne
Journal:  PLoS One       Date:  2019-03-01       Impact factor: 3.752

4.  COVID-19: the gendered impacts of the outbreak.

Authors:  Clare Wenham; Julia Smith; Rosemary Morgan
Journal:  Lancet       Date:  2020-03-06       Impact factor: 79.321

5.  The Rigor and Transparency Index Quality Metric for Assessing Biological and Medical Science Methods.

Authors:  Joe Menke; Martijn Roelandse; Burak Ozyurt; Maryann Martone; Anita Bandrowski
Journal:  iScience       Date:  2020-10-20
  5 in total
  8 in total

1.  Establishing Institutional Scores With the Rigor and Transparency Index: Large-scale Analysis of Scientific Reporting Quality.

Authors:  Joe Menke; Peter Eckmann; Ibrahim Burak Ozyurt; Martijn Roelandse; Nathan Anderson; Jeffrey Grethe; Anthony Gamst; Anita Bandrowski
Journal:  J Med Internet Res       Date:  2022-06-27       Impact factor: 7.076

Review 2.  Mouse Models of Osteoarthritis: A Summary of Models and Outcomes Assessment.

Authors:  Sabine Drevet; Bertrand Favier; Emmanuel Brun; Gaëtan Gavazzi; Bernard Lardy
Journal:  Comp Med       Date:  2022-01-05       Impact factor: 1.565

3.  Is the future of peer review automated?

Authors:  Robert Schulz; Adrian Barnett; René Bernard; Nicholas J L Brown; Jennifer A Byrne; Peter Eckmann; Małgorzata A Gazda; Halil Kilicoglu; Eric M Prager; Maia Salholz-Hillel; Gerben Ter Riet; Timothy Vines; Colby J Vorland; Han Zhuang; Anita Bandrowski; Tracey L Weissgerber
Journal:  BMC Res Notes       Date:  2022-06-11

4.  Finding the best fit for improving reproducibility: reflections from the QUEST Center for Responsible Research.

Authors:  Natascha Drude; Lorena Martinez-Gamboa; Tamarinde Haven; Constance Holman; Martin Holst; Silke Kniffert; Sarah McCann; Torsten Rackoll; Robert Schulz; Sarah Weschke
Journal:  BMC Res Notes       Date:  2022-08-03

5.  Replacing bar graphs of continuous data with more informative graphics: are we making progress?

Authors:  Nico Riedel; Robert Schulz; Vartan Kazezian; Tracey Weissgerber
Journal:  Clin Sci (Lond)       Date:  2022-08-12       Impact factor: 6.876

6.  Reporting and transparent research practices in sports medicine and orthopaedic clinical trials: a meta-research study.

Authors:  Robert Schulz; Georg Langen; Robert Prill; Michael Cassel; Tracey L Weissgerber
Journal:  BMJ Open       Date:  2022-08-08       Impact factor: 3.006

7.  Blind spots on western blots: Assessment of common problems in western blot figures and methods reporting with recommendations to improve them.

Authors:  Cristina Kroon; Larissa Breuer; Lydia Jones; Jeehye An; Ayça Akan; Elkhansa Ahmed Mohamed Ali; Felix Busch; Marinus Fislage; Biswajit Ghosh; Max Hellrigel-Holderbaum; Vartan Kazezian; Alina Koppold; Cesar Alberto Moreira Restrepo; Nico Riedel; Lea Scherschinski; Fernando Raúl Urrutia Gonzalez; Tracey L Weissgerber
Journal:  PLoS Biol       Date:  2022-09-12       Impact factor: 9.593

Review 8.  Technological advances in preclinical meta-research.

Authors:  Alexandra Bannach-Brown; Kaitlyn Hair; Zsanett Bahor; Nadia Soliman; Malcolm Macleod; Jing Liao
Journal:  BMJ Open Sci       Date:  2021-07-25
  8 in total

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