Literature DB >> 33432113

Ubiquitination in the regulation of inflammatory cell death and cancer.

Peter E Cockram1,2, Matthias Kist3, Sumit Prakash1, Si-Han Chen1, Ingrid E Wertz4,5, Domagoj Vucic6.   

Abstract

The ubiquitin system is complex, multifaceted, and is crucial for the modulation of a vast number of cellular processes. Ubiquitination is tightly regulated at different levels by a range of enzymes including E1s, E2s, and E3s, and an array of DUBs. The UPS directs protein degradation through the proteasome, and regulates a wide array of cellular processes including transcription and epigenetic factors as well as key oncoproteins. Ubiquitination is key to the dynamic regulation of programmed cell death. Notably, the TNF signaling pathway is controlled by competing ubiquitin conjugation and deubiquitination, which governs both proteasomal degradation and signaling complex formation. In the inflammatory response, ubiquitination is capable of both activating and dampening inflammasome activation through the control of either protein stability, complex formation, or, in some cases, directly affecting receptor activity. In this review, we discuss the enzymes and targets in the ubiquitin system that regulate fundamental cellular processes regulating cell death, and inflammation, as well as disease consequences resulting from their dysregulation. Finally, we highlight several pre-clinical and clinical compounds that regulate ubiquitin system enzymes, with the aim of restoring homeostasis and ameliorating diseases.

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Year:  2021        PMID: 33432113      PMCID: PMC7798376          DOI: 10.1038/s41418-020-00708-5

Source DB:  PubMed          Journal:  Cell Death Differ        ISSN: 1350-9047            Impact factor:   12.067


  187 in total

Review 1.  RING domain E3 ubiquitin ligases.

Authors:  Raymond J Deshaies; Claudio A P Joazeiro
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

Review 2.  Breaking the chains: structure and function of the deubiquitinases.

Authors:  David Komander; Michael J Clague; Sylvie Urbé
Journal:  Nat Rev Mol Cell Biol       Date:  2009-08       Impact factor: 94.444

Review 3.  The ubiquitin system.

Authors:  A Hershko; A Ciechanover
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

Review 4.  The demographics of the ubiquitin system.

Authors:  Michael J Clague; Claire Heride; Sylvie Urbé
Journal:  Trends Cell Biol       Date:  2015-04-21       Impact factor: 20.808

Review 5.  Branching Out: Improved Signaling by Heterotypic Ubiquitin Chains.

Authors:  Diane L Haakonsen; Michael Rape
Journal:  Trends Cell Biol       Date:  2019-07-09       Impact factor: 20.808

Review 6.  Ubiquitin chain diversity at a glance.

Authors:  Masato Akutsu; Ivan Dikic; Anja Bremm
Journal:  J Cell Sci       Date:  2016-02-15       Impact factor: 5.285

Review 7.  Historical perspectives on tumor necrosis factor and its superfamily: 25 years later, a golden journey.

Authors:  Bharat B Aggarwal; Subash C Gupta; Ji Hye Kim
Journal:  Blood       Date:  2011-11-03       Impact factor: 22.113

Review 8.  The ubiquitin code.

Authors:  David Komander; Michael Rape
Journal:  Annu Rev Biochem       Date:  2012-04-10       Impact factor: 23.643

Review 9.  Regulation of proteolysis by human deubiquitinating enzymes.

Authors:  Ziad M Eletr; Keith D Wilkinson
Journal:  Biochim Biophys Acta       Date:  2013-07-09

10.  Lys63/Met1-hybrid ubiquitin chains are commonly formed during the activation of innate immune signalling.

Authors:  Christoph H Emmerich; Siddharth Bakshi; Ian R Kelsall; Juanma Ortiz-Guerrero; Natalia Shpiro; Philip Cohen
Journal:  Biochem Biophys Res Commun       Date:  2016-04-29       Impact factor: 3.575

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  22 in total

1.  A review on cullin neddylation and strategies to identify its inhibitors for cancer therapy.

Authors:  Iqra Bano; Moolchand Malhi; Min Zhao; Liviu Giurgiulescu; Hira Sajjad; Marek Kieliszek
Journal:  3 Biotech       Date:  2022-03-29       Impact factor: 2.406

2.  OTUB2 Promotes Proliferation and Migration of Hepatocellular Carcinoma Cells by PJA1 Deubiquitylation.

Authors:  Gang Hu; Jianwu Yang; Hongwen Zhang; Zhen Huang; Heming Yang
Journal:  Cell Mol Bioeng       Date:  2022-02-01       Impact factor: 3.337

3.  Activity-based probe profiling of RNF12 E3 ubiquitin ligase function in Tonne-Kalscheuer syndrome.

Authors:  Francisco Bustos; Sunil Mathur; Carmen Espejo-Serrano; Rachel Toth; C James Hastie; Satpal Virdee; Greg M Findlay
Journal:  Life Sci Alliance       Date:  2022-06-28

4.  Disulfiram ameliorates ischemia/reperfusion-induced acute kidney injury by suppressing the caspase-11-GSDMD pathway.

Authors:  Qiaoting Cai; Zhaoxing Sun; Sujuan Xu; Xiaoyan Jiao; Shulan Guo; Yingxiang Li; Huan Wu; Xiaofang Yu
Journal:  Ren Fail       Date:  2022-12       Impact factor: 3.222

5.  The role of E3 ubiquitin ligase WWP2 and the regulation of PARP1 by ubiquitinated degradation in acute lymphoblastic leukemia.

Authors:  Xinxin Lu; Xinyue Huang; Haiqi Xu; Saien Lu; Shilong You; Jiaqi Xu; Qianru Zhan; Chao Dong; Ning Zhang; Ying Zhang; Liu Cao; Xingang Zhang; Naijin Zhang; Lijun Zhang
Journal:  Cell Death Discov       Date:  2022-10-18

6.  Immunoprecipitation Strategies to Isolate RIPK1/RIPK3 Complexes in Mouse Macrophages.

Authors:  Ioannis Siokas; Dingqiang Zhang; Alexander Poltorak; Hayley Muendlein; Alexei Degterev
Journal:  Curr Protoc       Date:  2021-06

7.  Friedelin Alleviates the Pathogenesis of Collagenase-Induced Tendinopathy in Mice by Promoting the Selective Autophagic Degradation of p65.

Authors:  Huaji Jiang; Xuemei Lin; Wei Liang; Yiqiang Li; Xiao Yu
Journal:  Nutrients       Date:  2022-04-18       Impact factor: 6.706

8.  Quercetin Preserves Oral Cavity Health by Mitigating Inflammation and Microbial Dysbiosis.

Authors:  Erin C Mooney; Sara E Holden; Xia-Juan Xia; Yajie Li; Min Jiang; Camille N Banson; Bin Zhu; Sinem Esra Sahingur
Journal:  Front Immunol       Date:  2021-11-26       Impact factor: 7.561

Review 9.  Tau mRNA Metabolism in Neurodegenerative Diseases: A Tangle Journey.

Authors:  Paulo J da Costa; Malika Hamdane; Luc Buée; Franck Martin
Journal:  Biomedicines       Date:  2022-01-23

10.  Prospero homeobox 1 promotes proliferation, migration, and invasion of osteosarcoma cells and its clinical significance.

Authors:  Dawei Liu; Ran Wang; Yuefeng Wang; Ye Wang; Liantang Wang
Journal:  Bioengineered       Date:  2022-02       Impact factor: 3.269

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