| Literature DB >> 33425046 |
Ayturk Keles1, Mustafa Berk Keles2, Ali Keles1.
Abstract
Chest CT is used in the COVID-19 diagnosis process as a significant complement to the reverse transcription polymerase chain reaction (RT-PCR) technique. However, it has several drawbacks, including long disinfection and ventilation times, excessive radiation effects, and high costs. While X-ray radiography is more useful for detecting COVID-19, it is insensitive to the early stages of the disease. We have developed inference engines that will turn X-ray machines into powerful diagnostic tools by using deep learning technology to detect COVID-19. We named these engines COV19-CNNet and COV19-ResNet. The former is based on convolutional neural network architecture; the latter is on residual neural network (ResNet) architecture. This research is a retrospective study. The database consists of 210 COVID-19, 350 viral pneumonia, and 350 normal (healthy) chest X-ray (CXR) images that were created using two different data sources. This study was focused on the problem of multi-class classification (COVID-19, viral pneumonia, and normal), which is a rather difficult task for the diagnosis of COVID-19. The classification accuracy levels for COV19-ResNet and COV19-CNNet were 97.61% and 94.28%, respectively. The inference engines were developed from scratch using new and special deep neural networks without pre-trained models, unlike other studies in the field. These powerful diagnostic engines allow for the early detection of COVID-19 as well as distinguish it from viral pneumonia with similar radiological appearances. Thus, they can help in fast recovery at the early stages, prevent the COVID-19 outbreak from spreading, and contribute to reducing pressure on health-care systems worldwide. © Springer Science+Business Media, LLC, part of Springer Nature 2021.Entities:
Keywords: CXR radiographs; Convolutional neural network; Novel coronavirus; Pneumonia; Residual network; SARS-CoV-2
Year: 2021 PMID: 33425046 PMCID: PMC7785922 DOI: 10.1007/s12559-020-09795-5
Source DB: PubMed Journal: Cognit Comput ISSN: 1866-9956 Impact factor: 4.890
Fig. 1Dataset and classes
Fig. 2COV19-CNNet architecture
Fig. 3a COV19-ResNet architecture, b Resnet_Block, c Identity_block, and d Conv_Block
Fig. 4Confusion matrix of a COV19-CNNet and b COV19-ResNet
The performance measures of COV19-CNNet and COV19-ResNet on test data
| Class | Accuracy | Precision | Recall/Sensitivity | Specificity | F1-score | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| M1 | M2 | M1 | M2 | M1 | M2 | M1 | M2 | M1 | M2 | |
| COVID-19 | 100.00 | 100.00 | 98.36 | 100.00 | 100.00 | 100.00 | 99.28 | 100.00 | 99.17 | 100.00 |
| Normal | 100.00 | 95.71 | 86.42 | 97.10 | 100.00 | 95.71 | 91.53 | 98.46 | 92.72 | 96.40 |
| Viral Pneumonia | 82.86 | 97.14 | 100.00 | 95.80 | 83.00 | 97.14 | 100.00 | 97.69 | 90.71 | 96.47 |
| Average | 94.28 | 97.61 | 94.93 | 97.63 | 94.33 | 97.61 | 96.94 | 98.72 | 94.20 | 97.62 |
| M1: COV19-CNNet; M2: COV19-ResNet | ||||||||||
Fig. 5Training-testing curves of accuracy and loss for a–b COV19-CNNet and c–d COV19-ResNet
DL applications on detecting COVID-19 from chest X-ray images
| Literature | Data set without augmentation | DL tool | Accuracy | Specificity | Sensitivity | F1 score |
|---|---|---|---|---|---|---|
| Loey et al. [ | 3 Classes N/C/P 69/79/79 | ALexnet | 85.19 | - | 85.19 | 85.19 |
| Googlenet | 81.48 | - | 81.48 | 81.46 | ||
| Resnet18 | 81.48 | - | 81.48 | 84.66 | ||
| Apostolopoulos and Mpesiana [ | 3 classes Dataset_1 N/C/BP 504/224/700 | VGG19 | 93.48 | 98.75 | 92.85 | |
| MobileNet (v2) | 92.85 | 97.09 | 99.10 | |||
| Inception | 92.85 | 99.70* | 12.94* | |||
| Xception | 92.85 | 99.99* | 0.08* | |||
| Inception ResNet v2 | 92.85 | 99.83* | 0.01* | |||
3 classes Dataset_2 N/C/BP+VP 504/224/714 | MobileNet (v2) | 94.72 | 96.46 | 98.66 | - | |
| Ucar and Korkmaz [ | 3 classes N/C/P 1583/76/4290 | SqueezeNet with raw dataset | 76.37 | 79.93 | - | 98.25 |
3 classes N/C/P 1536/1536/1536 | SqueezeNet with augmented dataset | 98.26 | 99.13 | - | 98.25 | |
| Ozturk et al. [ | 3 Classes N/C/P 500/127/500 | Darknet | 87.02 | 92.18 | 85.35 | 87 |
| Proposed study | 3 Classes N/C/VP 350/210/350 | COV19-CNNet | 94.28 | 96.94 | 94.33 | 94.20 |
| COV19-ResNet | 97.61 | 98.72 | 97.61 | 97.62 | ||
N: Normal (healthy) C: COVID-19 NC: Non-COVID-19 | P: Pneumonia VP: Viral pneumonia BP: Bacterial pneumonia | |||||
Fig. 6Comparison of chest radiological images: a X-ray and b CT thorax images