Literature DB >> 33420020

Disease risk scores for skin cancers.

Pierre Fontanillas1, Babak Alipanahi2, Nicholas A Furlotte2, Michaela Johnson2, Catherine H Wilson2, Steven J Pitts2, Robert Gentleman2, Adam Auton2.   

Abstract

We trained and validated risk prediction models for the three major types of skin cancer- basal cell carcinoma (BCC), squamous cell carcinoma (SCC), and melanoma-on a cross-sectional and longitudinal dataset of 210,000 consented research participants who responded to an online survey covering personal and family history of skin cancer, skin susceptibility, and UV exposure. We developed a primary disease risk score (DRS) that combined all 32 identified genetic and non-genetic risk factors. Top percentile DRS was associated with an up to 13-fold increase (odds ratio per standard deviation increase >2.5) in the risk of developing skin cancer relative to the middle DRS percentile. To derive lifetime risk trajectories for the three skin cancers, we developed a second and age independent disease score, called DRSA. Using incident cases, we demonstrated that DRSA could be used in early detection programs for identifying high risk asymptotic individuals, and predicting when they are likely to develop skin cancer. High DRSA scores were not only associated with earlier disease diagnosis (by up to 14 years), but also with more severe and recurrent forms of skin cancer.

Entities:  

Year:  2021        PMID: 33420020     DOI: 10.1038/s41467-020-20246-5

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  13 in total

1.  A shallow deep learning approach to classify skin cancer using down-scaling method to minimize time and space complexity.

Authors:  Sidratul Montaha; Sami Azam; A K M Rakibul Haque Rafid; Sayma Islam; Pronab Ghosh; Mirjam Jonkman
Journal:  PLoS One       Date:  2022-08-04       Impact factor: 3.752

2.  Using the Prediction Model Risk of Bias Assessment Tool (PROBAST) to Evaluate Melanoma Prediction Studies.

Authors:  Isabelle Kaiser; Sonja Mathes; Annette B Pfahlberg; Wolfgang Uter; Carola Berking; Markus V Heppt; Theresa Steeb; Katharina Diehl; Olaf Gefeller
Journal:  Cancers (Basel)       Date:  2022-06-20       Impact factor: 6.575

3.  Discovery of 42 genome-wide significant loci associated with dyslexia.

Authors:  Catherine Doust; Pierre Fontanillas; Else Eising; Scott D Gordon; Zhengjun Wang; Gökberk Alagöz; Barbara Molz; Beate St Pourcain; Clyde Francks; Riccardo E Marioni; Jingjing Zhao; Silvia Paracchini; Joel B Talcott; Anthony P Monaco; John F Stein; Jeffrey R Gruen; Richard K Olson; Erik G Willcutt; John C DeFries; Bruce F Pennington; Shelley D Smith; Margaret J Wright; Nicholas G Martin; Adam Auton; Timothy C Bates; Simon E Fisher; Michelle Luciano
Journal:  Nat Genet       Date:  2022-10-20       Impact factor: 41.307

Review 4.  Basal Cell Carcinoma: Pathology, Current Clinical Treatment, and Potential Use of Lipid Nanoparticles.

Authors:  Izabela Łasińska; Aleksandra Zielińska; Jacek Mackiewicz; Eliana B Souto
Journal:  Cancers (Basel)       Date:  2022-06-03       Impact factor: 6.575

5.  Targeting visualization of malignant tumor based on the alteration of DWI signal generated by hTERT promoter-driven AQP1 overexpression.

Authors:  Liang Zhang; Mingfu Gong; Sheng Lei; Chun Cui; Yun Liu; Shilin Xiao; Xun Kang; Tao Sun; Zhongsheng Xu; Chunyu Zhou; Si Zhang; Dong Zhang
Journal:  Eur J Nucl Med Mol Imaging       Date:  2022-01-19       Impact factor: 10.057

6.  Melanoma Classification Using a Novel Deep Convolutional Neural Network with Dermoscopic Images.

Authors:  Ranpreet Kaur; Hamid GholamHosseini; Roopak Sinha; Maria Lindén
Journal:  Sensors (Basel)       Date:  2022-02-02       Impact factor: 3.576

7.  Reporting Quality of Studies Developing and Validating Melanoma Prediction Models: An Assessment Based on the TRIPOD Statement.

Authors:  Isabelle Kaiser; Katharina Diehl; Markus V Heppt; Sonja Mathes; Annette B Pfahlberg; Theresa Steeb; Wolfgang Uter; Olaf Gefeller
Journal:  Healthcare (Basel)       Date:  2022-01-26

8.  Skin cancers and their risk factors in older persons: a population-based study.

Authors:  Suvi-Päivikki Sinikumpu; Jari Jokelainen; Sirkka Keinänen-Kiukaanniemi; Laura Huilaja
Journal:  BMC Geriatr       Date:  2022-04-01       Impact factor: 3.921

Review 9.  Advancing drug discovery using the power of the human genome.

Authors:  Karl Heilbron; Sahar V Mozaffari; Vladimir Vacic; Peng Yue; Wei Wang; Jingchunzi Shi; Adrian M Jubb; Steven J Pitts; Xin Wang
Journal:  J Pathol       Date:  2021-04-09       Impact factor: 7.996

Review 10.  NADPH Oxidase and Epidermal Growth Factor Receptor Are Promising Targets of Phytochemicals for Ultraviolet-Induced Skin Carcinogenesis.

Authors:  Min Jeong Kim; Su Jeong Ha; Bo Ram So; Chang-Kil Kim; Kyung-Min Kim; Sung Keun Jung
Journal:  Antioxidants (Basel)       Date:  2021-11-29
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