| Literature DB >> 33417138 |
Laura L Corona1,2, Liliana Wagner3,4, Joshua Wade5, Amy S Weitlauf3,4, Jeffrey Hine3,4, Amy Nicholson3,4,6, Caitlin Stone3,4, Alison Vehorn3, Zachary Warren3,4,6,7.
Abstract
Barriers to identifying autism spectrum disorder (ASD) in young children in a timely manner have led to calls for novel screening and assessment strategies. Combining computational methods with clinical expertise presents an opportunity for identifying patterns within large clinical datasets that can inform new assessment paradigms. The present study describes an analytic approach used to identify key features predictive of ASD in young children, drawn from large amounts of data from comprehensive diagnostic evaluations. A team of expert clinicians used these predictive features to design a set of assessment activities allowing for observation of these core behaviors. The resulting brief assessment underlies several novel approaches to the identification of ASD that are the focus of ongoing research.Entities:
Keywords: Assessment; Autism spectrum disorder; Machine learning; Young children
Mesh:
Year: 2021 PMID: 33417138 PMCID: PMC7791904 DOI: 10.1007/s10803-020-04857-x
Source DB: PubMed Journal: J Autism Dev Disord ISSN: 0162-3257
Participant demographics and scores from diagnostic evaluations
| ASD (n = 515) | Non-ASD (n = 222) | |
|---|---|---|
| Toddlers | ||
| Age in years ( | 2.17 [0.29] | 2.07 [0.33] |
| Male | 79.0% | 73.4% |
| Female | 21.0% | 26.6% |
| ADOS-2 Total Score ( | 21.32[4.62] | 6.95[5.05] |
| MSEL-ELC ( | 56.17 [10.99] | 69.94 [14.99] |
| Visual Reception ( | 27.60 [9.66] | 35.77 [10.87] |
| Fine Motor ( | 27.02 [9.26] | 34.19 [11.21] |
| Receptive Language ( | 22.06 [6.62] | 31.64 [11.39] |
| Expressive Language ( | 22.84 [5.81] | 31.78 [9.74] |
| VABS-2-ABC ( | 71.17 [16.10] | 79.99 [9.89] |
| Communication (SS) | 66.71 [9.70] | 80.44 [12.19] |
| Daily Living Skills (SS) | 72.61 [10.83] | 83.08 [12.99] |
| Socialization (SS) | 71.34 [8.17] | 81.83 [10.38] |
| Motor Skills (SS) | 82.80 [9.10] | 85.20 [11.05] |
ASD autism spectrum disorder, DD developmental delay, TD typically developing, MSEL-ELC mullen scales of early learning, early learning composite standard score, T T-score, VABS-2-ABC vineland adaptive behavior scales-second edition, adaptive behavior composite, SS standard score
Comparison of model performance on holdout set
| # | Model | Accuracy (%) | F-Score | Sensitivity | Specificity | UAR |
|---|---|---|---|---|---|---|
| 1 | ADOS-2 total score | 94 | 0.959 | 0.987 | 0.833 | 0.910 |
| 2 | Highest ranked single feature: a2 | 89 | 0.926 | 0.981 | 0.645 | 0.813 |
| 3 | 10 Highest ranked ( | 86 | 0.902 | 0.902 | 0.729 | 0.815 |
| 4 | 10 Highest ranked (Information Gain) | 85 | 0.901 | 0.920 | 0.661 | 0.791 |
| 5 | 10 Highest ranked (Pearson Correlation) | 84 | 0.888 | 0.871 | 0.746 | 0.808 |
| 6 | Top performing aggregated featurea | 87 | 0.914 | 0.945 | 0.661 | 0.803 |
| 7 | Top performing cluster + a3, d1, d2, and d5 | 87 | 0.914 | 0.901 | 0.780 | 0.844 |
UAR Unweighted Average Recall (Bone et al. 2015)
aTop performing aggregated feature: distance between the individual and the non-ASD centroid, which was composed of the means of ADOS-2 codes a2, b1, and b5 for the non-ASD sample
Fig. 1The top-performing centroids resulting from the data analytic team’s novel feature selection method were the three-component centroids composed of ADOS-2 codes a2, b1, and b5. The figure depicts the distance between the identified centroids and new data points, represented by the dashed lines. In much the same way that a k-nearest neighbors classifier predicts class association, our method defines a feature based on a measure of proximity to clusters that may reveal class association
The 10 highest-ranked features for each of three feature extraction methods
| Information Gain | Pearson Correlation | |
|---|---|---|
| Frequency of undirected vocalizations (a9) | Integration of gaze and other behaviors during social overtures (b5)* | Frequency of spontaneous vocalization directed to others (a2)* |
| Frequency of spontaneous vocalization directed to others (a2)* | Amount of social overtures/maintenance of attention to examiner (b16a)* | Facial expressions directed to others (b4) |
| Pointing (a7) | Frequency of spontaneous vocalization directed to others (a2)* | Quality of social overtures (b15) |
| Intonation of vocalizations or verbalizations (a3) | Unusual eye contact (b1) | Pointing (a7) |
| Showing (b12)* | Quality of social overtures (b15) | Showing (b12)* |
| Amount of social overtures/maintenance of attention to examiner (b16a)* | Intonation of vocalizations or verbalizations (a3) | Integration of gaze and other behaviors during social overtures (b5)* |
| Requesting (b9) | Facial expressions directed to others (b4) | Unusual eye contact (b1) |
| Ignore (b8) | Overall quality of rapport (b18) | Overall quality of rapport (b18) |
| Spontaneous initiation of joint attention (b13) | Frequency of undirected vocalizations (a9) | Requesting (b9) |
| Integration of gaze and other behaviors during social overtures (b5)* | Showing (b12)* | Amount of social overtures/maintenance of attention to examiner (b16a)* |
*The features common to all three feature selection methods were a2, b5, b12, and b16a. Alphanumeric notations after each feature refer to ADOS-2 Toddler Module codes. (Two children over the age of 30 months were administered the Toddler Module.)
Translation of predictive features identified through computational approach to underlying constructs and behavioral ratings
| Behavioral construct | Behavioral ratings | ||
|---|---|---|---|
| 1 (Symptom not present) | 2 (Symptom present but at subclinical levels) | 3 (Symptom clearly consistent with autism spectrum) | |
| Socially directed speech and sounds | Child often uses words or other vocalizations for a variety of social purposes (e.g. requesting, protesting, directing attention, sharing enjoyment) | Inconsistent socially directed speech | Most of the child’s sounds are self-directed. May make atypical non-word noises (e.g., “digga digga”) |
| Frequent and flexible eye contact | Child frequently makes eye contact with others and across a variety of activities | Child’s eye contact seems inconsistent. Gaze seems less flexible and harder to catch than expected | Child infrequently makes eye contact. Might only make eye contact during one activity (e.g., asking for help) |
| Unusual vocalizations | No unusual qualities of speech/language observed. Most of child’s speech is appropriate for the child’s age and developmental level | Speech is not clearly unusual, but there are some differences (e.g., volume, slight repetitive quality of speech/language, unclear echoing, some occasional sounds that are unusual) | Child produces unusual jargon, sounds, or speech/language (e.g., undirected jargoning, speech of peculiar intonation, unusual sounds, repetitive vocalizations, echoing or repetitive speech/language) |
| Unusual or repetitive play | Child plays with toys in appropriate ways (uses toys as expected) | Child’s play is not clearly unusual, but child is strongly focused on some toys, routines, or activities. May sometimes be hard to shift child’s attention to something new | Child shows clearly repetitive or unusual play, such as repeatedly pushing buttons, watching how objects move, lining things up, or scrambling/dropping toys |
| Unusual or repetitive body movements | No unusual or repetitive body movements seen | Unclear unusual/repetitive body movements. Some repetitive jumping or very brief posturing of fingers, hands, or arms that is not clearly atypical | Child clearly shows unusual or repetitive (e.g., hand-flapping, posturing or tensing upper body, toe-walking, facial grimacing, hand/finger mannerisms) repetitive running/walking/spinning/jumping |
| Combines gestures, eye contact, and speech/vocalization | Child frequently points and uses other gestures to communicate. Child’s gestures are usually combined with vocalizations and eye contact | Child may sometimes point or use other gestures, but less than expected. Child does not always look at you or make a sound when gesturing | Child does not usually gesture to communicate. May sometimes reach or point, but does not usually combine these with eye gaze or sounds. May move your hand or push on your body to get help |
| Unusual sensory exploration or reaction | No unusual sensory behavior observed | Unclear sensory exploration or reaction. May have a brief response to a sound, smell, or how something feels or moves | Child shows sensory differences. May closely inspect objects, overreact to sounds, show intense interest or dislike to textures (e.g., touching, licking, biting, refusing to touch specific toys), or clear self-injurious behavior |
Administration activities
| Activity | Administration guidelines |
|---|---|
| Child-directed play | Provider introduces 3–5 age appropriate toys and observes the child’s independent play |
| Joint play | Provider joins child’s play and initiates interactive play attempts |
| Calling name | Provider calls the child’s name and observes response |
| Directing child’s attention | Provider gets the child’s attention, then shifts gaze and points to an object across the room while verbally directing the child to look |
| Familiar play routine | Provider initiates a social routine with the child (e.g., peekaboo) |
| Ready-set-go routine | Provider blows up a balloon, holds it in the air, and says Ready, set, go! before releasing balloon. Provider repeats several times, pausing to observe child’s reaction and allow for child to respond to continue the activity |
| Requesting | |
| Bubbles | Provider blows bubbles for the child, then pauses while holding the bubbles out of reach. Provider observes whether and how child requests activity to continue |
| Snack | Provider offers child a snack in a container that child cannot open independently. Provider observes whether and how child requests snack or assistance |
| Independent play with ignoring | Provider re-presents independent play toys and removes attention from child |