Literature DB >> 33410996

A new virus of the family Tombusviridae infecting sugarcane.

Muhammad N Tahir1,2, Stephen Bolus1, Samuel C Grinstead1, Sharon A McFarlane3, Dimitre Mollov4.   

Abstract

Many viral diseases of sugarcane negatively affect yield. A sugarcane accession originating from South Africa exhibiting mosaic symptoms was processed for high-throughput sequencing. Bioinformatic analysis revealed two known sugarcane viruses and a contig of around 2,800 nucleotides resembling umbra-like viruses of the family Tombusviridae. The sequence of the viral contig was confirmed by cloning and Sanger sequencing, and the ends of the virus sequence were determined. Open reading frame analysis revealed the presence of four ORFs. Phylogenetic analysis of the complete virus sequence showed that this virus clusters with other umbra-like viruses of the family Tombusviridae.

Entities:  

Year:  2021        PMID： 33410996     DOI： 10.1007/s00705-020-04908-9

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  6 in total

1.  Two new umbravirus-like associated RNAs (ulaRNAs) discovered in maize and johnsongrass from Ecuador.

Authors:  Diego F Quito-Avila; Edison G Reyes-Proaño; Alma Mendoza; Paolo Margaria; Wulf Menzel; Sayanta Bera; Anne E Simon
Journal:  Arch Virol       Date:  2022-07-12       Impact factor: 2.685

2.  Complete genome sequence of a novel virus belonging to the genus Badnavirus in jujube (Ziziphus jujuba Mill.) in China.

Authors:  Baojun Liu; Guoxin Zhang; Danbo Song; Quan Wang; Hong Li; Aixing Gu; Jianyu Bai
Journal:  Arch Virol       Date:  2022-06-03       Impact factor: 2.685

3.  Identification of Novel 5' and 3' Translation Enhancers in Umbravirus-Like Coat Protein-Deficient RNA Replicons.

Authors:  Jingyuan Liu; Anne E Simon
Journal:  J Virol       Date:  2022-03-17       Impact factor: 6.549

4.  Structural Analysis and Whole Genome Mapping of a New Type of Plant Virus Subviral RNA: Umbravirus-Like Associated RNAs.

Authors:  Jingyuan Liu; Elizabeth Carino; Sayanta Bera; Feng Gao; Jared P May; Anne E Simon
Journal:  Viruses       Date:  2021-04-09       Impact factor: 5.048

5.  Metagenomics Analysis of the Wheat Virome Identifies Novel Plant and Fungal-Associated Viral Sequences.

Authors:  Carla Dizon Redila; Ved Prakash; Shahideh Nouri
Journal:  Viruses       Date:  2021-12-07       Impact factor: 5.048

6.  Comparison of the Virome of Quarantined Sugarcane Varieties and the Virome of Grasses Growing near the Quarantine Station.

Authors:  Jean H Daugrois; Denis Filloux; Charlotte Julian; Lisa Claude; Romain Ferdinand; Emmanuel Fernandez; Hugo Fontes; Philippe C Rott; Philippe Roumagnac
Journal:  Viruses       Date:  2021-05-16       Impact factor: 5.048
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.