Literature DB >> 33406797

Comparison of Morphological and Genetic Characteristics of Avocados Grown in Tanzania.

Ibrahim Juma1,2, Mulatu Geleta1, Helena Persson Hovmalm1, Agnes Nyomora2, Ganapathi Varma Saripella1, Anders S Carlsson1, Moneim Fatih1, Rodomiro Ortiz1.   

Abstract

Tanzania has been growing avocado for decades. A wide variability of the avocado germplasm has been found, and the crop is largely contributing to the earnings of the farmers, traders, and the government, but its genetic diversity is scantly investigated. With the purpose of comparing morphological and genetic characteristics of this germplasm and uncovering the correlation between them and the geographical location, 226 adult seedling avocado trees were sampled in southwestern Tanzania. Their morphological characters were recorded, and their genetic diversity was evaluated based on 10 microsatellite loci. Discriminant analysis of principal components showed that the germplasm studied consisted of four genetic clusters that had an overall average gene diversity of 0.59 and 15.9% molecular variation among them. Most of the phenotypes were common in at least two clusters. The genetic clusters were also portrayed by multivariate analysis and hierarchical clustering for the molecular data but not for the morphology data. Using the Mantel test, a weak significant correlation was found between the genetic, morphological, and geographical distances, which indicates that the genetic variation present in the material is weakly reflected by the observed phenotypic variation and that both measures of variation varied slightly with the geographical sampling locations.

Entities:  

Keywords:  Persea americana; correlation; diversity; microsatellite; population structure

Mesh:

Year:  2021        PMID: 33406797      PMCID: PMC7824774          DOI: 10.3390/genes12010063

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  17 in total

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5.  Genetic Structure and Selection of a Core Collection for Long Term Conservation of Avocado in Mexico.

Authors:  Luis F Guzmán; Ryoko Machida-Hirano; Ernesto Borrayo; Moisés Cortés-Cruz; María Del Carmen Espíndola-Barquera; Elena Heredia García
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Journal:  Genes (Basel)       Date:  2019-03-13       Impact factor: 4.096

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9.  Genome-Wide SNP discovery and genomic characterization in avocado (Persea americana Mill.).

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10.  Genetic diversity of avocado from the southern highlands of Tanzania as revealed by microsatellite markers.

Authors:  Ibrahim Juma; Mulatu Geleta; Agnes Nyomora; Ganapathi Varma Saripella; Helena Persson Hovmalm; Anders S Carlsson; Moneim Fatih; Rodomiro Ortiz
Journal:  Hereditas       Date:  2020-09-14       Impact factor: 3.271

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