Literature DB >> 33403557

Characterization and comparison of the complete mitochondrial genomes of two stingrays, Dasyatis pastinaca and Dasyatis tortonesei (Myliobatiformes: Dasyatidae) from the Mediterranean Sea.

Noel Vella1, Adriana Vella2.   

Abstract

This work represents the complete mitochondrial genomes of two stingrays, Dasyatis pastinaca and Dasyatis tortonesei, from the Mediterranean Sea. The mitogenomes of these two species were obtained through whole generation sequencing and annotated. These mitogenomes were found to be 17,713 bp and 17,630 bp respectively and each contained 37 genes, that is 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes and two ribosomal RNA (rRNA) genes, a control region and the origin of L-strand replication (OL). All PCGs begin with the codon ATG, except for cytochrome c oxidase subunit 1 (COX1) gene, while two PCGs end with an incomplete termination codon. All tRNA genes are able to fold into their typical cloverleaf secondary structures, except for tRNA-Ser1AGY which lacks the dihydrouracil arm. The control region was 1982 bp and 1889 bp for D. pastinaca and D. tortonesei respectively. Phylogenetic analysis using Bayesian Inference confirmed the occurrence of the genus Dasyatis within the monophyletic subfamily Dasyatinae. This study adds on genetic resources available for these two stingray species.

Entities:  

Keywords:  Dasyatidae; Dasyatis pastinaca; Dasyatis tortonesei; Mitogenome; Phylogeny

Mesh:

Substances:

Year:  2021        PMID: 33403557     DOI: 10.1007/s11033-020-06038-6

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  24 in total

1.  In vitro replication of human mitochondrial DNA: accurate initiation at the origin of light-strand synthesis.

Authors:  T W Wong; D A Clayton
Journal:  Cell       Date:  1985-10       Impact factor: 41.582

2.  A revised classification of the family Dasyatidae (Chondrichthyes: Myliobatiformes) based on new morphological and molecular insights.

Authors:  Peter R Last; Gavin J P Naylor; B Mabel Manjaji-Matsumoto
Journal:  Zootaxa       Date:  2016-07-21       Impact factor: 1.091

3.  [Medical measures in status asthmaticus. Progressive airway obstruction can be therapeutically controlled today--bronchodilators].

Authors:  B Höltmann
Journal:  Fortschr Med       Date:  1988-03-30

4.  tRNAscan-SE: Searching for tRNA Genes in Genomic Sequences.

Authors:  Patricia P Chan; Todd M Lowe
Journal:  Methods Mol Biol       Date:  2019

5.  Mitochondrial genome of longheaded eagle ray Aetobatus flagellum (Chondrichthyes: Myliobatidae).

Authors:  Jie Zhang; Baojuan Yang; Atsuko Yamaguchi; Keisuke Furumitsu; Baowei Zhang
Journal:  Mitochondrial DNA       Date:  2014-01-07

6.  A molecular approach towards taxonomic identification of elasmobranch species from Maltese fisheries landings.

Authors:  Adriana Vella; Noel Vella; Sarah Schembri
Journal:  Mar Genomics       Date:  2017-10-03       Impact factor: 1.710

7.  Complete mitochondrial genome of the pelagic stingray Pteroplatytrygon violacea (Myliobatiformes: Dasyatidae).

Authors:  Chao-Pin Yang; Ting-Ting Zhi; Shuai Zhang; Shuai Yan; Tingbao Yang
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-06-18       Impact factor: 1.514

8.  Determination of complete mitochondrial genome sequence from the holotype of the southern Mandarin dogfish Cirrhigaleus australis (Elasmobranchii: Squalidae).

Authors:  Lei Yang; Kerri A Matthes-Rosana; Gavin J P Naylor
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2014-04-14       Impact factor: 1.514

9.  Structure and evolution of teleost mitochondrial control regions.

Authors:  W J Lee; J Conroy; W H Howell; T D Kocher
Journal:  J Mol Evol       Date:  1995-07       Impact factor: 2.395

10.  Molecular and morphological analyses reveal phylogenetic relationships of stingrays focusing on the family Dasyatidae (Myliobatiformes).

Authors:  Kean Chong Lim; Phaik-Eem Lim; Ving Ching Chong; Kar-Hoe Loh
Journal:  PLoS One       Date:  2015-04-13       Impact factor: 3.240

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