| Literature DB >> 31020551 |
Patricia P Chan1, Todd M Lowe2.
Abstract
Transfer RNAs are the largest, most complex non-coding RNA family, universal to all living organisms. tRNAscan-SE has been the de facto tool for predicting tRNA genes in whole genomes. The newly developed version 2.0 has incorporated advanced methodologies with improved probabilistic search software and a suite of new gene models, enabling better functional classification of predicted genes. This chapter describes the use of the UNIX command-driven and online web versions, illustrating different search modes and options.Entities:
Keywords: Covariance model; Gene prediction; Non-coding RNA; RNA secondary structure; Transfer RNA
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Year: 2019 PMID： 31020551 PMCID： PMC6768409 DOI： 10.1007/978-1-4939-9173-0_1
Source DB: PubMed Journal: Methods Mol Biol ISSN： 1064-3745