Literature DB >> 33402098

Beyond K48 and K63: non-canonical protein ubiquitination.

Michal Tracz1, Wojciech Bialek2.   

Abstract

Protein ubiquitination has become one of the most extensively studied post-translational modifications. Originally discovered as a critical element in highly regulated proteolysis, ubiquitination is now regarded as essential for many other cellular processes. This results from the unique features of ubiquitin (Ub) and its ability to form various homo- and heterotypic linkage types involving one of the seven different lysine residues or the free amino group located at its N-terminus. While K48- and K63-linked chains are broadly covered in the literature, the other types of chains assembled through K6, K11, K27, K29, and K33 residues deserve equal attention in the light of the latest discoveries. Here, we provide a concise summary of recent advances in the field of these poorly understood Ub linkages and their possible roles in vivo.

Entities:  

Keywords:  Atypical ubiquitination; Non-canonical; Ubiquitin; Ubiquitin chains

Year:  2021        PMID: 33402098      PMCID: PMC7786512          DOI: 10.1186/s11658-020-00245-6

Source DB:  PubMed          Journal:  Cell Mol Biol Lett        ISSN: 1425-8153            Impact factor:   5.787


  147 in total

1.  Rhbdd3 controls autoimmunity by suppressing the production of IL-6 by dendritic cells via K27-linked ubiquitination of the regulator NEMO.

Authors:  Juan Liu; Chaofeng Han; Bin Xie; Yue Wu; Shuxun Liu; Kun Chen; Meng Xia; Yuan Zhang; Lijun Song; Zhiqing Li; Ting Zhang; Feng Ma; Qingqing Wang; Jianli Wang; Kejing Deng; Yuan Zhuang; Xiaohui Wu; Yizhi Yu; Tian Xu; Xuetao Cao
Journal:  Nat Immunol       Date:  2014-05-25       Impact factor: 25.606

2.  K33-Linked Polyubiquitination of Coronin 7 by Cul3-KLHL20 Ubiquitin E3 Ligase Regulates Protein Trafficking.

Authors:  Wei-Chien Yuan; Yu-Ru Lee; Shu-Yu Lin; Li-Ying Chang; Yen Pei Tan; Chin-Chun Hung; Jean-Cheng Kuo; Cheng-Hsin Liu; Mei-Yao Lin; Ming Xu; Zhijian J Chen; Ruey-Hwa Chen
Journal:  Mol Cell       Date:  2014-04-24       Impact factor: 17.970

Review 3.  Branching Out: Improved Signaling by Heterotypic Ubiquitin Chains.

Authors:  Diane L Haakonsen; Michael Rape
Journal:  Trends Cell Biol       Date:  2019-07-09       Impact factor: 20.808

4.  Ube2s regulates Sox2 stability and mouse ES cell maintenance.

Authors:  J Wang; Y Zhang; J Hou; X Qian; H Zhang; Z Zhang; M Li; R Wang; K Liao; Y Wang; Z Li; D Zhong; P Wan; L Dong; F Liu; X Wang; Y Wan; W Xiao; W W Zhang
Journal:  Cell Death Differ       Date:  2015-08-21       Impact factor: 15.828

Review 5.  Cellular quality control by the ubiquitin-proteasome system and autophagy.

Authors:  Christian Pohl; Ivan Dikic
Journal:  Science       Date:  2019-11-14       Impact factor: 47.728

6.  LZTR1 is a regulator of RAS ubiquitination and signaling.

Authors:  Johannes W Bigenzahn; Giovanna M Collu; Felix Kartnig; Melanie Pieraks; Gregory I Vladimer; Leonhard X Heinz; Vitaly Sedlyarov; Fiorella Schischlik; Astrid Fauster; Manuele Rebsamen; Katja Parapatics; Vincent A Blomen; André C Müller; Georg E Winter; Robert Kralovics; Thijn R Brummelkamp; Marek Mlodzik; Giulio Superti-Furga
Journal:  Science       Date:  2018-11-15       Impact factor: 47.728

7.  Quantitative Proteomic Atlas of Ubiquitination and Acetylation in the DNA Damage Response.

Authors:  Andrew E H Elia; Alexander P Boardman; David C Wang; Edward L Huttlin; Robert A Everley; Noah Dephoure; Chunshui Zhou; Itay Koren; Steven P Gygi; Stephen J Elledge
Journal:  Mol Cell       Date:  2015-06-04       Impact factor: 17.970

8.  MGRN1-mediated ubiquitination of α-tubulin regulates microtubule dynamics and intracellular transport.

Authors:  Rukmini Mukherjee; Priyanka Majumder; Oishee Chakrabarti
Journal:  Traffic       Date:  2017-10-04       Impact factor: 6.215

9.  Porcine RING Finger Protein 114 Inhibits Classical Swine Fever Virus Replication via K27-Linked Polyubiquitination of Viral NS4B.

Authors:  Yuexiu Zhang; Huawei Zhang; Guang-Lai Zheng; Qian Yang; Shaoxiong Yu; Jinghan Wang; Su Li; Lian-Feng Li; Hua-Ji Qiu
Journal:  J Virol       Date:  2019-10-15       Impact factor: 5.103

10.  Ubiquitination of UVRAG by SMURF1 promotes autophagosome maturation and inhibits hepatocellular carcinoma growth.

Authors:  Xing Feng; Yanyan Jia; Yuyu Zhang; Fei Ma; Yuekun Zhu; Xuehui Hong; Qingxin Zhou; Ruixing He; Heng Zhang; Junfei Jin; Daxun Piao; He Huang; Qinghua Li; Xingfeng Qiu; Zhiyong Zhang
Journal:  Autophagy       Date:  2019-01-27       Impact factor: 16.016

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  21 in total

Review 1.  TRIMs: selective recruitment at different steps of the NF-κB pathway-determinant of activation or resolution of inflammation.

Authors:  Milton Roy; Rajesh Singh
Journal:  Cell Mol Life Sci       Date:  2021-07-20       Impact factor: 9.261

2.  A viral interferon regulatory factor degrades RNA-binding protein hnRNP Q1 to enhance aerobic glycolysis via recruiting E3 ubiquitin ligase KLHL3 and decaying GDPD1 mRNA.

Authors:  Xiaoyu Qi; Qin Yan; Yuancui Shang; Runran Zhao; Xiangya Ding; Shou-Jiang Gao; Wan Li; Chun Lu
Journal:  Cell Death Differ       Date:  2022-05-10       Impact factor: 15.828

3.  High-Frequency Irreversible Electroporation (H-FIRE) Induced Blood-Brain Barrier Disruption Is Mediated by Cytoskeletal Remodeling and Changes in Tight Junction Protein Regulation.

Authors:  Brittanie R Partridge; Yukitaka Kani; Melvin F Lorenzo; Sabrina N Campelo; Irving C Allen; Jonathan Hinckley; Fang-Chi Hsu; Scott S Verbridge; John L Robertson; Rafael V Davalos; John H Rossmeisl
Journal:  Biomedicines       Date:  2022-06-11

Review 4.  Non-proteolytic ubiquitylation in cellular signaling and human disease.

Authors:  Yongrong Liao; Izabela Sumara; Evanthia Pangou
Journal:  Commun Biol       Date:  2022-02-08

Review 5.  From Drosophila to Human: Biological Function of E3 Ligase Godzilla and Its Role in Disease.

Authors:  Valérie C Cabana; Marc P Lussier
Journal:  Cells       Date:  2022-01-23       Impact factor: 6.600

Review 6.  Atypical Ubiquitination and Parkinson's Disease.

Authors:  Olga Buneeva; Alexei Medvedev
Journal:  Int J Mol Sci       Date:  2022-03-28       Impact factor: 5.923

Review 7.  Ubiquitin-Mediated Control of ETS Transcription Factors: Roles in Cancer and Development.

Authors:  Charles Ducker; Peter E Shaw
Journal:  Int J Mol Sci       Date:  2021-05-12       Impact factor: 5.923

8.  E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein.

Authors:  Michał Tracz; Ireneusz Górniak; Andrzej Szczepaniak; Wojciech Białek
Journal:  Int J Mol Sci       Date:  2021-05-27       Impact factor: 5.923

Review 9.  The Ubiquitin Proteasome System as a Double Agent in Plant-Virus Interactions.

Authors:  Ullrich Dubiella; Irene Serrano
Journal:  Plants (Basel)       Date:  2021-05-06

Review 10.  Advances in Proteasome Enhancement by Small Molecules.

Authors:  Dare E George; Jetze J Tepe
Journal:  Biomolecules       Date:  2021-11-30
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