Literature DB >> 33401386

Type IA Topoisomerases as Targets for Infectious Disease Treatments.

Ahmed Seddek1,2, Thirunavukkarasu Annamalai1, Yuk-Ching Tse-Dinh1,2.   

Abstract

Infectious diseases are one of the main causes of death all over the world, with antimicrobial resistance presenting a great challenge. New antibiotics need to be developed to provide therapeutic treatment options, requiring novel drug targets to be identified and pursued. DNA topoisomerases control the topology of DNA via DNA cleavage-rejoining coupled to DNA strand passage. The change in DNA topological features must be controlled in vital processes including DNA replication, transcription, and DNA repair. Type IIA topoisomerases are well established targets for antibiotics. In this review, type IA topoisomerases in bacteria are discussed as potential targets for new antibiotics. In certain bacterial pathogens, topoisomerase I is the only type IA topoisomerase present, which makes it a valuable antibiotic target. This review will summarize recent attempts that have been made to identify inhibitors of bacterial topoisomerase I as potential leads for antibiotics and use of these inhibitors as molecular probes in cellular studies. Crystal structures of inhibitor-enzyme complexes and more in-depth knowledge of their mechanisms of actions will help to establish the structure-activity relationship of potential drug leads and develop potent and selective therapeutics that can aid in combating the drug resistant bacterial infections that threaten public health.

Entities:  

Keywords:  antimicrobial resistance; drug targets; topoisomerase

Year:  2021        PMID: 33401386      PMCID: PMC7823277          DOI: 10.3390/microorganisms9010086

Source DB:  PubMed          Journal:  Microorganisms        ISSN: 2076-2607


  129 in total

Review 1.  DNA topoisomerases and their poisoning by anticancer and antibacterial drugs.

Authors:  Yves Pommier; Elisabetta Leo; HongLiang Zhang; Christophe Marchand
Journal:  Chem Biol       Date:  2010-05-28

2.  Bacterial cell killing mediated by topoisomerase I DNA cleavage activity.

Authors:  Bokun Cheng; Shikha Shukla; Sarinnapha Vasunilashorn; Somshuvra Mukhopadhyay; Yuk-Ching Tse-Dinh
Journal:  J Biol Chem       Date:  2005-09-13       Impact factor: 5.157

3.  Covalent bonds between protein and DNA. Formation of phosphotyrosine linkage between certain DNA topoisomerases and DNA.

Authors:  Y C Tse; K Kirkegaard; J C Wang
Journal:  J Biol Chem       Date:  1980-06-25       Impact factor: 5.157

4.  PPEF: A bisbenzimdazole potent antimicrobial agent interacts at acidic triad of catalytic domain of E. coli topoisomerase IA.

Authors:  Raja Singh; Stuti Pandey; Souvik Sur; Vibha Tandon
Journal:  Biochim Biophys Acta Gen Subj       Date:  2019-05-27       Impact factor: 3.770

5.  Escherichia coli DNA topoisomerase I copurifies with Tn5 transposase, and Tn5 transposase inhibits topoisomerase I.

Authors:  H Yigit; W S Reznikoff
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

6.  Mice lacking DNA topoisomerase IIIbeta develop to maturity but show a reduced mean lifespan.

Authors:  K Y Kwan; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-01       Impact factor: 11.205

7.  Discovery of novel bacterial topoisomerase I inhibitors by use of in silico docking and in vitro assays.

Authors:  Shayna Sandhaus; Prem P Chapagain; Yuk-Ching Tse-Dinh
Journal:  Sci Rep       Date:  2018-01-23       Impact factor: 4.379

8.  Bacterial topoisomerase I and topoisomerase III relax supercoiled DNA via distinct pathways.

Authors:  Ksenia Terekhova; Kathryn H Gunn; John F Marko; Alfonso Mondragón
Journal:  Nucleic Acids Res       Date:  2012-08-25       Impact factor: 16.971

9.  RNA topoisomerase is prevalent in all domains of life and associates with polyribosomes in animals.

Authors:  Muzammil Ahmad; Yutong Xue; Seung Kyu Lee; Jennifer L Martindale; Weiping Shen; Wen Li; Sige Zou; Maria Ciaramella; Hélène Debat; Marc Nadal; Fenfei Leng; Hongliang Zhang; Quan Wang; Grace Ee-Lu Siaw; Hengyao Niu; Yves Pommier; Myriam Gorospe; Tao-Shih Hsieh; Yuk-Ching Tse-Dinh; Dongyi Xu; Weidong Wang
Journal:  Nucleic Acids Res       Date:  2016-06-01       Impact factor: 16.971

10.  Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.

Authors:  Nan Cao; Kemin Tan; Thirunavukkarasu Annamalai; Andrzej Joachimiak; Yuk-Ching Tse-Dinh
Journal:  Nucleic Acids Res       Date:  2018-08-21       Impact factor: 16.971

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  1 in total

1.  What is a supercoiling-sensitive gene? Insights from topoisomerase I inhibition in the Gram-negative bacterium Dickeya dadantii.

Authors:  Maïwenn Pineau; Shiny Martis B; Raphaël Forquet; Jessica Baude; Camille Villard; Lucie Grand; Florence Popowycz; Laurent Soulère; Florence Hommais; William Nasser; Sylvie Reverchon; Sam Meyer
Journal:  Nucleic Acids Res       Date:  2022-08-11       Impact factor: 19.160

  1 in total

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