Literature DB >> 33398020

Structural insights into photoactivation of plant Cryptochrome-2.

Malathy Palayam1, Jagadeesan Ganapathy1, Angelica M Guercio1, Lior Tal1, Samuel L Deck1, Nitzan Shabek2.   

Abstract

Cryptochromes (CRYs) are evolutionarily conserved photoreceptors that mediate various light-induced responses in bacteria, plants, and animals. Plant cryptochromes govern a variety of critical growth and developmental processes including seed germination, flowering time and entrainment of the circadian clock. CRY's photocycle involves reduction of their flavin adenine dinucleotide (FAD)-bound chromophore, which is completely oxidized in the dark and semi to fully reduced in the light signaling-active state. Despite the progress in characterizing cryptochromes, important aspects of their photochemistry, regulation, and light-induced structural changes remain to be addressed. In this study, we determine the crystal structure of the photosensory domain of Arabidopsis CRY2 in a tetrameric active state. Systematic structure-based analyses of photo-activated and inactive plant CRYs elucidate distinct structural elements and critical residues that dynamically partake in photo-induced oligomerization. Our study offers an updated model of CRYs photoactivation mechanism as well as the mode of its regulation by interacting proteins.

Entities:  

Year:  2021        PMID: 33398020      PMCID: PMC7782693          DOI: 10.1038/s42003-020-01531-x

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  65 in total

1.  ATP binding and aspartate protonation enhance photoinduced electron transfer in plant cryptochrome.

Authors:  Fabien Cailliez; Pavel Müller; Michaël Gallois; Aurélien de la Lande
Journal:  J Am Chem Soc       Date:  2014-09-07       Impact factor: 15.419

Review 2.  Photocycle and signaling mechanisms of plant cryptochromes.

Authors:  Margaret Ahmad
Journal:  Curr Opin Plant Biol       Date:  2016-07-14       Impact factor: 7.834

3.  Improvements to the APBS biomolecular solvation software suite.

Authors:  Elizabeth Jurrus; Dave Engel; Keith Star; Kyle Monson; Juan Brandi; Lisa E Felberg; David H Brookes; Leighton Wilson; Jiahui Chen; Karina Liles; Minju Chun; Peter Li; David W Gohara; Todd Dolinsky; Robert Konecny; David R Koes; Jens Erik Nielsen; Teresa Head-Gordon; Weihua Geng; Robert Krasny; Guo-Wei Wei; Michael J Holst; J Andrew McCammon; Nathan A Baker
Journal:  Protein Sci       Date:  2017-10-24       Impact factor: 6.725

4.  A CRY-BIC negative-feedback circuitry regulating blue light sensitivity of Arabidopsis.

Authors:  Xu Wang; Qin Wang; Yun-Jeong Han; Qing Liu; Lianfeng Gu; Zhaohe Yang; Jun Su; Bobin Liu; Zecheng Zuo; Wenjin He; Jian Wang; Bin Liu; Minami Matsui; Jeong-Il Kim; Yoshito Oka; Chentao Lin
Journal:  Plant J       Date:  2017-10-09       Impact factor: 6.417

5.  Formation of Arabidopsis Cryptochrome 2 photobodies in mammalian nuclei: application as an optogenetic DNA damage checkpoint switch.

Authors:  Irem Ozkan-Dagliyan; Yi-Ying Chiou; Rui Ye; Bachar H Hassan; Nuri Ozturk; Aziz Sancar
Journal:  J Biol Chem       Date:  2013-07-05       Impact factor: 5.157

6.  Genetic dissection of blue-light sensing in tomato using mutants deficient in cryptochrome 1 and phytochromes A, B1 and B2.

Authors:  J L Weller; G Perrotta; M E Schreuder; A van Tuinen; M Koornneef; G Giuliano; R E Kendrick
Journal:  Plant J       Date:  2001-02       Impact factor: 6.417

7.  Proton transfer to flavin stabilizes the signaling state of the blue light receptor plant cryptochrome.

Authors:  Anika Hense; Elena Herman; Sabine Oldemeyer; Tilman Kottke
Journal:  J Biol Chem       Date:  2014-12-03       Impact factor: 5.157

8.  An Arabidopsis protein closely related to Synechocystis cryptochrome is targeted to organelles.

Authors:  Tatjana Kleine; Peter Lockhart; Alfred Batschauer
Journal:  Plant J       Date:  2003-07       Impact factor: 6.417

9.  Crystal structure of DNA photolyase from Escherichia coli.

Authors:  H W Park; S T Kim; A Sancar; J Deisenhofer
Journal:  Science       Date:  1995-06-30       Impact factor: 47.728

Review 10.  Signaling mechanisms of plant cryptochromes in Arabidopsis thaliana.

Authors:  Bobin Liu; Zhaohe Yang; Adam Gomez; Bin Liu; Chentao Lin; Yoshito Oka
Journal:  J Plant Res       Date:  2016-01-25       Impact factor: 2.629

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  10 in total

1.  UBP12 and UBP13 deubiquitinases destabilize the CRY2 blue light receptor to regulate Arabidopsis growth.

Authors:  Louise N Lindbäck; Yuzhao Hu; Amanda Ackermann; Oliver Artz; Ullas V Pedmale
Journal:  Curr Biol       Date:  2022-06-13       Impact factor: 10.900

2.  Direct experimental observation of blue-light-induced conformational change and intermolecular interactions of cryptochrome.

Authors:  Pei Li; Huaqiang Cheng; Vikash Kumar; Cecylia Severin Lupala; Xuanxuan Li; Yingchen Shi; Chongjun Ma; Keehyoung Joo; Jooyoung Lee; Haiguang Liu; Yan-Wen Tan
Journal:  Commun Biol       Date:  2022-10-18

Review 3.  Illuminating the COP1/SPA Ubiquitin Ligase: Fresh Insights Into Its Structure and Functions During Plant Photomorphogenesis.

Authors:  Jathish Ponnu; Ute Hoecker
Journal:  Front Plant Sci       Date:  2021-03-24       Impact factor: 5.753

4.  Regulation of Arabidopsis photoreceptor CRY2 by two distinct E3 ubiquitin ligases.

Authors:  Yadi Chen; Xiaohua Hu; Siyuan Liu; Tiantian Su; Hsiaochi Huang; Huibo Ren; Zhensheng Gao; Xu Wang; Deshu Lin; James A Wohlschlegel; Qin Wang; Chentao Lin
Journal:  Nat Commun       Date:  2021-04-12       Impact factor: 14.919

5.  An optogenetic proximity labeling approach to probe the composition of inducible biomolecular condensates in cultured cells.

Authors:  Emile Alghoul; Jihane Basbous; Angelos Constantinou
Journal:  STAR Protoc       Date:  2021-07-22

Review 6.  Towards the Idea of Molecular Brains.

Authors:  Youri Timsit; Sergeant-Perthuis Grégoire
Journal:  Int J Mol Sci       Date:  2021-11-01       Impact factor: 5.923

Review 7.  Bioluminescence and Photoreception in Unicellular Organisms: Light-Signalling in a Bio-Communication Perspective.

Authors:  Youri Timsit; Magali Lescot; Martha Valiadi; Fabrice Not
Journal:  Int J Mol Sci       Date:  2021-10-20       Impact factor: 5.923

Review 8.  Optogenetic and Chemical Induction Systems for Regulation of Transgene Expression in Plants: Use in Basic and Applied Research.

Authors:  Evgeniya S Omelina; Anastasiya A Yushkova; Daria M Motorina; Grigorii A Volegov; Elena N Kozhevnikova; Alexey V Pindyurin
Journal:  Int J Mol Sci       Date:  2022-02-03       Impact factor: 5.923

Review 9.  Signaling Mechanisms by Arabidopsis Cryptochromes.

Authors:  Jathish Ponnu; Ute Hoecker
Journal:  Front Plant Sci       Date:  2022-02-28       Impact factor: 5.753

10.  Phylogenomics-Based Reconstruction and Molecular Evolutionary Histories of Brassica Photoreceptor Gene Families.

Authors:  Muthusamy Muthusamy; Jin-A Kim; Soo-In Lee
Journal:  Int J Mol Sci       Date:  2022-08-04       Impact factor: 6.208

  10 in total

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